Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq134661 163 9e-36 >seq134661 Length=10369 Score = 163 bits (180), Expect = 9e-36 Identities = 281/407 (69%), Gaps = 6/407 (1%) Strand=Plus/Minus Query 38936 GGCGGCAGGACCCGCAGGCCCATGCGCCGCGCCTCGCCGAGGTACGTGGCCATCTTGTTC 38995 |||||||| || |||||| | | ||| ||||| ||||| | | ||| ||||| Sbjct 4713 GGCGGCAGCACGGTCAGGCCGAGGTTGCGCACCTCGTCGAGGAAGCCGACCACCTTGTCG 4654 Query 38996 TTGTCGTCGCCCACCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 39055 ||| ||| |||| | ||| |||||||||| ||||||||||||| || ||| Sbjct 4653 GTGTTGTCCATGTCCGAAGACAGCGTGGCCGCCATGAACTCGGCCGGGTAATGGCGCTTG 4594 Query 39056 AGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCG 39115 || |||| || |||| || ||| |||| || || | ||||| |||||||||| || Sbjct 4593 AGCCACGCGGTCTGGTAACTGACCAGCGCGTAGGCAGCGGCGTGCGACTTGTTGAAGCCG 4534 Query 39116 TACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCTGGA---TGGCGCTGTCCGAGTAG 39172 || |||||||| | | || ||| | | | | | | ||| || ||| | | Sbjct 4533 TAGCCGGCGAACTTCTCCATCAGGTCGAAGATCTCGTCGGCCTTGGGGCCGTC---GACG 4477 Query 39173 CCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTC 39232 || | || | ||| |||| ||||| || || | |||||||| | | ||| | Sbjct 4476 CCGCCCTTGGCCGCACCCTCGCGGAAGATCTCGCGGTGCTTGGCCATTTCGGCCGGCACC 4417 Query 39233 TTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGATC 39292 ||||||||||| || ||||||||||||||||| |||||| |||||| ||| |||| Sbjct 4416 TTCTTGCCCATCGCACGACGCAGCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACGATC 4357 Query 39293 TGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGTACGT 39339 |||||| || | ||||||||||||||| | |||| ||||| || Sbjct 4356 TGCGCCATCTGCATCACCTGCTCCTGGTACACCATGATGCCGTAGGT 4310 Score = 156 bits (172), Expect = 1e-33 Identities = 235/332 (71%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 40090 GCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGAT 40149 |||| |||| |||||| ||| ||| |||||| || | |||||| ||| Sbjct 3550 GCCGTAGGTGATGATCTGGCTGACGCGTTCGCGCCCGTATTTGCGCGCGACGTAGTCGAT 3491 Query 40150 GACCTCGCCGCGACGCCGGTCATC--GAAGTCGATGTCAACGTCGGGCATGGACACGCGC 40207 || ||| |||| || | ||| ||| |||||||| | ||||||||| |||||||| Sbjct 3490 CACTTCGTCGCGGCG--GTCCATGCAGAAATCGATGTCGAAGTCGGGCATCGACACGCGT 3433 Query 40208 TCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATC 40267 || || |||||||| |||||||| | || || ||| ||||| |||||||||||| Sbjct 3432 TCCGGATTCAGGAAGCGCTCGAACAGCAGGTTGTAGGGCAGCGGATCCAGGTCGGTGATC 3373 Query 40268 CCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACG 40327 || | || |||||||||||||| | || || || || || |||| | | | Sbjct 3372 TTCAGCGCCCACGCCACCAGCGAACCGGCACCAGAACCACGGCCCGGGCCGATCGGGATG 3313 Query 40328 CCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCC 40387 || | | |||| |||| |||||||||||| |||| |||||||||| ||||| ||| Sbjct 3312 CCCTGGTTCTTGCCCCACTGGATGAAGTCGGCCACGATCAGGAAGTAGCCGGGGAAACCC 3253 Query 40388 ATCTGGATGATCATGTCGATCTCGTACTGGAG 40419 |||| |||||| |||||| |||| | | ||| Sbjct 3252 ATCTTGATGATGGTGTCGAGCTCGAATTCGAG 3221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160068481962774