Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_028827.1
Length=50165
Score E
Sequences producing significant alignments: (Bits) Value
seq134661 163 9e-36
>seq134661
Length=10369
Score = 163 bits (180), Expect = 9e-36
Identities = 281/407 (69%), Gaps = 6/407 (1%)
Strand=Plus/Minus
Query 38936 GGCGGCAGGACCCGCAGGCCCATGCGCCGCGCCTCGCCGAGGTACGTGGCCATCTTGTTC 38995
|||||||| || |||||| | | ||| ||||| ||||| | | ||| |||||
Sbjct 4713 GGCGGCAGCACGGTCAGGCCGAGGTTGCGCACCTCGTCGAGGAAGCCGACCACCTTGTCG 4654
Query 38996 TTGTCGTCGCCCACCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 39055
||| ||| |||| | ||| |||||||||| ||||||||||||| || |||
Sbjct 4653 GTGTTGTCCATGTCCGAAGACAGCGTGGCCGCCATGAACTCGGCCGGGTAATGGCGCTTG 4594
Query 39056 AGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCG 39115
|| |||| || |||| || ||| |||| || || | ||||| |||||||||| ||
Sbjct 4593 AGCCACGCGGTCTGGTAACTGACCAGCGCGTAGGCAGCGGCGTGCGACTTGTTGAAGCCG 4534
Query 39116 TACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCTGGA---TGGCGCTGTCCGAGTAG 39172
|| |||||||| | | || ||| | | | | | | ||| || ||| | |
Sbjct 4533 TAGCCGGCGAACTTCTCCATCAGGTCGAAGATCTCGTCGGCCTTGGGGCCGTC---GACG 4477
Query 39173 CCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTC 39232
|| | || | ||| |||| ||||| || || | |||||||| | | ||| |
Sbjct 4476 CCGCCCTTGGCCGCACCCTCGCGGAAGATCTCGCGGTGCTTGGCCATTTCGGCCGGCACC 4417
Query 39233 TTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGATC 39292
||||||||||| || ||||||||||||||||| |||||| |||||| ||| ||||
Sbjct 4416 TTCTTGCCCATCGCACGACGCAGCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACGATC 4357
Query 39293 TGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGTACGT 39339
|||||| || | ||||||||||||||| | |||| ||||| ||
Sbjct 4356 TGCGCCATCTGCATCACCTGCTCCTGGTACACCATGATGCCGTAGGT 4310
Score = 156 bits (172), Expect = 1e-33
Identities = 235/332 (71%), Gaps = 4/332 (1%)
Strand=Plus/Minus
Query 40090 GCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGAT 40149
|||| |||| |||||| ||| ||| |||||| || | |||||| |||
Sbjct 3550 GCCGTAGGTGATGATCTGGCTGACGCGTTCGCGCCCGTATTTGCGCGCGACGTAGTCGAT 3491
Query 40150 GACCTCGCCGCGACGCCGGTCATC--GAAGTCGATGTCAACGTCGGGCATGGACACGCGC 40207
|| ||| |||| || | ||| ||| |||||||| | ||||||||| ||||||||
Sbjct 3490 CACTTCGTCGCGGCG--GTCCATGCAGAAATCGATGTCGAAGTCGGGCATCGACACGCGT 3433
Query 40208 TCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATC 40267
|| || |||||||| |||||||| | || || ||| ||||| ||||||||||||
Sbjct 3432 TCCGGATTCAGGAAGCGCTCGAACAGCAGGTTGTAGGGCAGCGGATCCAGGTCGGTGATC 3373
Query 40268 CCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACG 40327
|| | || |||||||||||||| | || || || || || |||| | | |
Sbjct 3372 TTCAGCGCCCACGCCACCAGCGAACCGGCACCAGAACCACGGCCCGGGCCGATCGGGATG 3313
Query 40328 CCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCC 40387
|| | | |||| |||| |||||||||||| |||| |||||||||| ||||| |||
Sbjct 3312 CCCTGGTTCTTGCCCCACTGGATGAAGTCGGCCACGATCAGGAAGTAGCCGGGGAAACCC 3253
Query 40388 ATCTGGATGATCATGTCGATCTCGTACTGGAG 40419
|||| |||||| |||||| |||| | | |||
Sbjct 3252 ATCTTGATGATGGTGTCGAGCTCGAATTCGAG 3221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160068481962774
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |