Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq169861 91.5 4e-14 seq171861 80.6 7e-11 >seq169861 Length=3996 Score = 91.5 bits (100), Expect = 4e-14 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 31252 TTTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTAC 31311 ||||||||| |||| ||||||||||| |||||||| || ||| | || |||||||||| Sbjct 1231 TTTGGCTGCCCCGGATGGATTCGAACCACCGAATGCCTGAGTCAGAGTCAGGTGCCTTAC 1290 Query 31312 CGCTTGGCGACGGCGCAA 31329 ||||||||||||| |||| Sbjct 1291 CGCTTGGCGACGGGGCAA 1308 >seq171861 Length=4903 Score = 80.6 bits (88), Expect = 7e-11 Identities = 62/73 (85%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 31253 TTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTT--A 31310 ||||| | | |||||||||||||||||||||||||| | ||||||| | |||||||| Sbjct 1861 TTGGCAGGGGCGGTAGGATTCGAACCTACGAATGCCAGGATCAAAACCTGGTGCCTTGGG 1920 Query 31311 CCGCTTGGCGACG 31323 || |||||||||| Sbjct 1921 CCTCTTGGCGACG 1933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137907266154494