Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq134661 145 2e-30 >seq134661 Length=10369 Score = 145 bits (160), Expect = 2e-30 Identities = 203/283 (72%), Gaps = 4/283 (1%) Strand=Plus/Minus Query 39045 GACGTACCGGATCACGTCGCCACGGCGACGGTCATC--GAAGTCGATGTCCACGTCGGGC 39102 |||||| |||||| ||| | ||||| | ||| ||| |||||||| | ||||||| Sbjct 3502 GACGTAGTCGATCACTTCGTCGCGGCG--GTCCATGCAGAAATCGATGTCGAAGTCGGGC 3445 Query 39103 ATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCC 39162 || || || || || || |||||||| |||||||| | || || || | || ||| Sbjct 3444 ATCGACACGCGTTCCGGATTCAGGAAGCGCTCGAACAGCAGGTTGTAGGGCAGCGGATCC 3385 Query 39163 AGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGG 39222 |||||||||||| || || |||| ||||||| || || |||| || || || ||| Sbjct 3384 AGGTCGGTGATCTTCAGCGCCCACGCCACCAGCGAACCGGCACCAGAACCACGGCCCGGG 3325 Query 39223 CCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTAC 39282 |||| | | ||| | | ||| |||| |||||||||||| |||| |||||||| Sbjct 3324 CCGATCGGGATGCCCTGGTTCTTGCCCCACTGGATGAAGTCGGCCACGATCAGGAAGTAG 3265 Query 39283 GACGGGAACCCCATCTGGTTGATCATGTCGATCTCGTACTCGA 39325 ||||| ||||||| | |||| |||||| |||| | |||| Sbjct 3264 CCGGGGAAACCCATCTTGATGATGGTGTCGAGCTCGAATTCGA 3222 Score = 131 bits (144), Expect = 5e-26 Identities = 437/677 (65%), Gaps = 55/677 (8%) Strand=Plus/Minus Query 37875 CTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCGC 37934 |||| ||||| | | ||| ||||| ||| ||| |||| | ||| |||||| Sbjct 4681 CTCGTCGAGGAAGCCGACCACCTTGTCGGTGTTGTCCATGTCCGAAGACAGCGTGGCCGC 4622 Query 37935 CATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTA 37994 |||| ||||||||||||| || ||| || |||| || |||| || || |||| Sbjct 4621 CATGAACTCGGCCGGGTAATGGCGCTTGAGCCACGCGGTCTGGTAACTGACCAGCGCGTA 4562 Query 37995 CGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACAC 38054 || || | ||||| |||||||||| |||| |||||||| | | || ||| | | Sbjct 4561 GGCAGCGGCGTGCGACTTGTTGAAGCCGTAGCCGGCGAACTTCTCCATCAGGTCGAAGAT 4502 Query 38055 CGCC-CGGA-TGGCAGCCTCCGAGTAGCCTCGCTCGCTCGCCCCCTTCTGGAAGTTCACG 38112 | | ||| | | ||| ||| ||| | || | ||| |||| ||||| || || Sbjct 4501 CTCGTCGGCCTTGGGGCCGTCGAC--GCCGCCCTTGGCCGCACCCTCGCGGAAGATCTCG 4444 Query 38113 AACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCC 38172 | |||||||| | | ||| |||||||||||| || ||||| || |||||||| Sbjct 4443 CGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCGCACGACGCAGCAGGTCGGCG 4384 Query 38173 TGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATG 38232 || || | ||| ||| | | |||||||||| || | ||||||||||||||| | Sbjct 4383 CCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCATCACCTGCTCCTGGTACACC 4324 Query 38233 ATGAGCCCGAAGGTCGGGTCC---AGGAT---CTCGGCCAGCGGCTCCTCCACCTCGGGG 38286 |||| ||| |||| |||| ||||| |||| |||| ||||| Sbjct 4323 ATGATGCCGTAGGT---GTCCTTGAGGATGGCTTCGGTGCGCGG---------ATCGGGA 4276 Query 38287 TGGATCGGCGTGATCTCCTGCTGACCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCC 38346 | || |||| || | ||| |||| ||||| ||| ||| | || | Sbjct 4275 TAGA------TGATTTCTTCCTGCCCGTGCTTGC-----GCG-CGTTGAAGGACGGAATC 4228 Query 38347 ATGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAACTGGTCC 38406 | | ||||||| || || |||||||||| || | || | ||| ||||| |||| Sbjct 4227 AGGTCCATCGGGCCGGGGCGGTACAGCGACACCAGCGCGATCAGGTCTTCGAAACGGTCG 4168 Query 38407 GG---------CTTCAGCAGGCGAAGCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAAG 38457 || |||||||||||| |||||| || | |||| ||||||| Sbjct 4167 GGGCGTGCGTCCTTCAGCAGGCG---------GCGCATGCCGGAGGATTCGAACTGGAAG 4117 Query 38458 ACCGAGAGGGTGTCGCCCCTGGCCAGCA---GCTCGTAGGTTGCCGGGTCGTCCAGCGGG 38514 |||| ||||| ||| |||| | | || |||||| | || ||||||||||||| Sbjct 4116 ACCGCACCGGTGTTGCCGTTGGCGAAGATGTCCTTGTAGGTCGGCGCGTCGTCCAGCGGG 4057 Query 38515 ATGTTCTCGATGTCGAC 38531 || | ||||||| || Sbjct 4056 ATCGCCGCGATGTCCAC 4040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159378738070182