Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
seq134661 145 2e-30
>seq134661
Length=10369
Score = 145 bits (160), Expect = 2e-30
Identities = 203/283 (72%), Gaps = 4/283 (1%)
Strand=Plus/Minus
Query 39045 GACGTACCGGATCACGTCGCCACGGCGACGGTCATC--GAAGTCGATGTCCACGTCGGGC 39102
|||||| |||||| ||| | ||||| | ||| ||| |||||||| | |||||||
Sbjct 3502 GACGTAGTCGATCACTTCGTCGCGGCG--GTCCATGCAGAAATCGATGTCGAAGTCGGGC 3445
Query 39103 ATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCC 39162
|| || || || || || |||||||| |||||||| | || || || | || |||
Sbjct 3444 ATCGACACGCGTTCCGGATTCAGGAAGCGCTCGAACAGCAGGTTGTAGGGCAGCGGATCC 3385
Query 39163 AGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGG 39222
|||||||||||| || || |||| ||||||| || || |||| || || || |||
Sbjct 3384 AGGTCGGTGATCTTCAGCGCCCACGCCACCAGCGAACCGGCACCAGAACCACGGCCCGGG 3325
Query 39223 CCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTAC 39282
|||| | | ||| | | ||| |||| |||||||||||| |||| ||||||||
Sbjct 3324 CCGATCGGGATGCCCTGGTTCTTGCCCCACTGGATGAAGTCGGCCACGATCAGGAAGTAG 3265
Query 39283 GACGGGAACCCCATCTGGTTGATCATGTCGATCTCGTACTCGA 39325
||||| ||||||| | |||| |||||| |||| | ||||
Sbjct 3264 CCGGGGAAACCCATCTTGATGATGGTGTCGAGCTCGAATTCGA 3222
Score = 131 bits (144), Expect = 5e-26
Identities = 437/677 (65%), Gaps = 55/677 (8%)
Strand=Plus/Minus
Query 37875 CTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCGC 37934
|||| ||||| | | ||| ||||| ||| ||| |||| | ||| ||||||
Sbjct 4681 CTCGTCGAGGAAGCCGACCACCTTGTCGGTGTTGTCCATGTCCGAAGACAGCGTGGCCGC 4622
Query 37935 CATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTA 37994
|||| ||||||||||||| || ||| || |||| || |||| || || ||||
Sbjct 4621 CATGAACTCGGCCGGGTAATGGCGCTTGAGCCACGCGGTCTGGTAACTGACCAGCGCGTA 4562
Query 37995 CGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACAC 38054
|| || | ||||| |||||||||| |||| |||||||| | | || ||| | |
Sbjct 4561 GGCAGCGGCGTGCGACTTGTTGAAGCCGTAGCCGGCGAACTTCTCCATCAGGTCGAAGAT 4502
Query 38055 CGCC-CGGA-TGGCAGCCTCCGAGTAGCCTCGCTCGCTCGCCCCCTTCTGGAAGTTCACG 38112
| | ||| | | ||| ||| ||| | || | ||| |||| ||||| || ||
Sbjct 4501 CTCGTCGGCCTTGGGGCCGTCGAC--GCCGCCCTTGGCCGCACCCTCGCGGAAGATCTCG 4444
Query 38113 AACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCC 38172
| |||||||| | | ||| |||||||||||| || ||||| || ||||||||
Sbjct 4443 CGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCGCACGACGCAGCAGGTCGGCG 4384
Query 38173 TGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATG 38232
|| || | ||| ||| | | |||||||||| || | ||||||||||||||| |
Sbjct 4383 CCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCATCACCTGCTCCTGGTACACC 4324
Query 38233 ATGAGCCCGAAGGTCGGGTCC---AGGAT---CTCGGCCAGCGGCTCCTCCACCTCGGGG 38286
|||| ||| |||| |||| ||||| |||| |||| |||||
Sbjct 4323 ATGATGCCGTAGGT---GTCCTTGAGGATGGCTTCGGTGCGCGG---------ATCGGGA 4276
Query 38287 TGGATCGGCGTGATCTCCTGCTGACCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCC 38346
| || |||| || | ||| |||| ||||| ||| ||| | || |
Sbjct 4275 TAGA------TGATTTCTTCCTGCCCGTGCTTGC-----GCG-CGTTGAAGGACGGAATC 4228
Query 38347 ATGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAACTGGTCC 38406
| | ||||||| || || |||||||||| || | || | ||| ||||| ||||
Sbjct 4227 AGGTCCATCGGGCCGGGGCGGTACAGCGACACCAGCGCGATCAGGTCTTCGAAACGGTCG 4168
Query 38407 GG---------CTTCAGCAGGCGAAGCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAAG 38457
|| |||||||||||| |||||| || | |||| |||||||
Sbjct 4167 GGGCGTGCGTCCTTCAGCAGGCG---------GCGCATGCCGGAGGATTCGAACTGGAAG 4117
Query 38458 ACCGAGAGGGTGTCGCCCCTGGCCAGCA---GCTCGTAGGTTGCCGGGTCGTCCAGCGGG 38514
|||| ||||| ||| |||| | | || |||||| | || |||||||||||||
Sbjct 4116 ACCGCACCGGTGTTGCCGTTGGCGAAGATGTCCTTGTAGGTCGGCGCGTCGTCCAGCGGG 4057
Query 38515 ATGTTCTCGATGTCGAC 38531
|| | ||||||| ||
Sbjct 4056 ATCGCCGCGATGTCCAC 4040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159378738070182
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |