Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq164418 316 1e-81 >seq164418 Length=2565 Score = 316 bits (350), Expect = 1e-81 Identities = 580/836 (69%), Gaps = 39/836 (5%) Strand=Plus/Plus Query 66453 AGACCGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGG 66512 || |||| || | ||| || ||||| || | || ||| ||| |||||||||||| Sbjct 628 AGCCCGTCGAAGCCATCCCGACCGGTTCGCTGATGCTCGACATCGCATTGGGCATCGGGG 687 Query 66513 GGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTC 66572 | |||| |||||| |||||||||||||| || || || || || || ||| | || | Sbjct 688 GTCTGCCGAAGGGCCGCGTGGTGGAAATCTATGGACCGGAGTCCTCGGGCAAGACCACGC 747 Query 66573 TGTGTCTCCACGCGGTGGCC-AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGAC 66631 || || || || | ||| | ||| |||||| || |||| ||| |||| |||||| Sbjct 748 TGACGCTGCAGGCCATCGCCGAGTGC-CAGAAGATGGGAGGCACCGCTGCCTTCATCGAT 806 Query 66632 GCTGAGCACTCCCTGGACCCTGAGTA---CGCCAAGGCGCTCGGTGTGGACCTCGACAAC 66688 || |||||| | || ||||| || |||||| ||| || ||| || | ||| | Sbjct 807 GCCGAGCACGCTCTCGACCCGATCTATGCCGCCAA---GCTTGGCGTGAACGTGGACGAT 863 Query 66689 CTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTC 66748 || || || |||||||||||||| || ||||| |||| |||| ||| | || ||| Sbjct 864 CTGCTGCTGTCGCAGCCCGATACCGGTGAACAGGCATTGGAAATCGCCGACATGCTGGTC 923 Query 66749 AAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCC 66808 || ||| | || |||| | || | ||||| || ||||| || ||| ||| Sbjct 924 CGTTCCGGCTCGGTGGACATCCTGGTGATCGACTCGGTCGCGGCATTGACCCCGAAGGCC 983 Query 66809 GAGCTCGAAGGCGACATCGGGGA-CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACA 66867 || |||| ||||| || || || |||| | || ||||| || ||||| ||| || Sbjct 984 GAAATCGAGGGCGAGATGGGCGACCAGTTGC-CGGGTCTGCAGGCCCGCCTGATGAGCCA 1042 Query 66868 GGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAA 66927 ||| |||| ||||| || |||| |||| || | ||||||||| | ||| |||| Sbjct 1043 GGCGCTGCGTAAGCTGACCGGCAACATCAAGCGCTCGAACACGCTGGTGATCTTCATCAA 1102 Query 66928 CCAGTTGCGCGAGAAGATCGGC------AACGTGGGCTACGGCCCGAATGAGACCACCAC 66981 |||| ||||| |||||||||| | |||| | ||||| ||||||||||| Sbjct 1103 CCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGGCCAGAGCCCG---GAGACCACCAC 1159 Query 66982 GGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATC---GC 67038 ||| || || || ||| |||||| ||||| |||||| |||| |||| |||||| || Sbjct 1160 GGGTGGCAACGCGCTGAAGTTCTATGCCTCGGTCCGTCTGGACATCCGCCGCATCGGTGC 1219 Query 67039 CACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAA 67098 || | ||||| ||||||||| |||| |||| ||| | | |||||||||||||| Sbjct 1220 CATCAAGAAG---GGCGATGAGATCATCGGTAACCAGACCAAGATCAAGGTCGTCAAGAA 1276 Query 67099 CAAGCTGGCCCCGCCGCACCGCAATGCCGAGT--TCTCCG---TCGTGTACGGGGAGGGC 67153 |||||||||||||||| | | || | || || ||| || |||| || || ||| Sbjct 1277 CAAGCTGGCCCCGCCGTTC----AAGCAG-GTAATCACCGAGATCCTGTATGGCGAAGGC 1331 Query 67154 ATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTG--TCGCAGGGCCTGGTGAAGAAGT 67211 ||| ||||| | ||||| ||||| ||| |||| | || | ||||| ||||| Sbjct 1332 ATCAGCCGTGAAGGTGAACTGATCGACATGGGCGTGGATGCCAAG--CTGGTCGAGAAGG 1389 Query 67212 CGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCCCAGGGCAAGCCCAAGGCC 67267 | || ||||||| || || || || || | ||| |||||||||| ||| ||| Sbjct 1390 CCGGTGCCTGGTACAGCTATGGCGAAGAGCGCATCGGCCAGGGCAAGGACAACGCC 1445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242335716811734