Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_028906.1
Length=75933
Score E
Sequences producing significant alignments: (Bits) Value
seq164418 316 1e-81
>seq164418
Length=2565
Score = 316 bits (350), Expect = 1e-81
Identities = 580/836 (69%), Gaps = 39/836 (5%)
Strand=Plus/Plus
Query 66453 AGACCGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGG 66512
|| |||| || | ||| || ||||| || | || ||| ||| ||||||||||||
Sbjct 628 AGCCCGTCGAAGCCATCCCGACCGGTTCGCTGATGCTCGACATCGCATTGGGCATCGGGG 687
Query 66513 GGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTC 66572
| |||| |||||| |||||||||||||| || || || || || || ||| | || |
Sbjct 688 GTCTGCCGAAGGGCCGCGTGGTGGAAATCTATGGACCGGAGTCCTCGGGCAAGACCACGC 747
Query 66573 TGTGTCTCCACGCGGTGGCC-AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGAC 66631
|| || || || | ||| | ||| |||||| || |||| ||| |||| ||||||
Sbjct 748 TGACGCTGCAGGCCATCGCCGAGTGC-CAGAAGATGGGAGGCACCGCTGCCTTCATCGAT 806
Query 66632 GCTGAGCACTCCCTGGACCCTGAGTA---CGCCAAGGCGCTCGGTGTGGACCTCGACAAC 66688
|| |||||| | || ||||| || |||||| ||| || ||| || | ||| |
Sbjct 807 GCCGAGCACGCTCTCGACCCGATCTATGCCGCCAA---GCTTGGCGTGAACGTGGACGAT 863
Query 66689 CTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTC 66748
|| || || |||||||||||||| || ||||| |||| |||| ||| | || |||
Sbjct 864 CTGCTGCTGTCGCAGCCCGATACCGGTGAACAGGCATTGGAAATCGCCGACATGCTGGTC 923
Query 66749 AAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCC 66808
|| ||| | || |||| | || | ||||| || ||||| || ||| |||
Sbjct 924 CGTTCCGGCTCGGTGGACATCCTGGTGATCGACTCGGTCGCGGCATTGACCCCGAAGGCC 983
Query 66809 GAGCTCGAAGGCGACATCGGGGA-CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACA 66867
|| |||| ||||| || || || |||| | || ||||| || ||||| ||| ||
Sbjct 984 GAAATCGAGGGCGAGATGGGCGACCAGTTGC-CGGGTCTGCAGGCCCGCCTGATGAGCCA 1042
Query 66868 GGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAA 66927
||| |||| ||||| || |||| |||| || | ||||||||| | ||| ||||
Sbjct 1043 GGCGCTGCGTAAGCTGACCGGCAACATCAAGCGCTCGAACACGCTGGTGATCTTCATCAA 1102
Query 66928 CCAGTTGCGCGAGAAGATCGGC------AACGTGGGCTACGGCCCGAATGAGACCACCAC 66981
|||| ||||| |||||||||| | |||| | ||||| |||||||||||
Sbjct 1103 CCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGGCCAGAGCCCG---GAGACCACCAC 1159
Query 66982 GGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATC---GC 67038
||| || || || ||| |||||| ||||| |||||| |||| |||| |||||| ||
Sbjct 1160 GGGTGGCAACGCGCTGAAGTTCTATGCCTCGGTCCGTCTGGACATCCGCCGCATCGGTGC 1219
Query 67039 CACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAA 67098
|| | ||||| ||||||||| |||| |||| ||| | | ||||||||||||||
Sbjct 1220 CATCAAGAAG---GGCGATGAGATCATCGGTAACCAGACCAAGATCAAGGTCGTCAAGAA 1276
Query 67099 CAAGCTGGCCCCGCCGCACCGCAATGCCGAGT--TCTCCG---TCGTGTACGGGGAGGGC 67153
|||||||||||||||| | | || | || || ||| || |||| || || |||
Sbjct 1277 CAAGCTGGCCCCGCCGTTC----AAGCAG-GTAATCACCGAGATCCTGTATGGCGAAGGC 1331
Query 67154 ATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTG--TCGCAGGGCCTGGTGAAGAAGT 67211
||| ||||| | ||||| ||||| ||| |||| | || | ||||| |||||
Sbjct 1332 ATCAGCCGTGAAGGTGAACTGATCGACATGGGCGTGGATGCCAAG--CTGGTCGAGAAGG 1389
Query 67212 CGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGCCCAGGGCAAGCCCAAGGCC 67267
| || ||||||| || || || || || | ||| |||||||||| ||| |||
Sbjct 1390 CCGGTGCCTGGTACAGCTATGGCGAAGAGCGCATCGGCCAGGGCAAGGACAACGCC 1445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242335716811734
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |