Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq174594 1122 0.0 seq171395 179 1e-40 >seq174594 Length=7134 Score = 1122 bits (1244), Expect = 0.0 Identities = 1250/1653 (76%), Gaps = 33/1653 (2%) Strand=Plus/Minus Query 52733 CATCATTACTGGTTCCGCAAGCCCGCCGACGTATCCCTGCTTGACTCGCTGGACGACTAC 52792 || || ||||||||| ||||||||||||||| ||||| ||| ||||| |||||| Sbjct 7059 CACCACTACTGGTTCACCAAGCCCGCCGACGTGCAGCTGCTCGACAGCCTGGAGGACTAC 7000 Query 52793 CAGGGCGTGGAGTTCAAGAGCCTTGGCCGCCAAGTAGTCGCTGCCGGCTCAGTCCACCCG 52852 | ||||||||||||||||||| |||||||| || ||||| || ||||| || |||||| Sbjct 6999 CCCGGCGTGGAGTTCAAGAGCCACGGCCGCCAGGTCGTCGCCGCGGGCTCCGTGCACCCG 6940 Query 52853 TCAGGCCGTCACTATGAATGGGACGACCTTGCCCCTGCCTTGCAGGATGGGCTGCCTGAA 52912 | || || | || || ||||||||||| | || | | || | || | || || || Sbjct 6939 TGCGGGCGCCGGTACGAGTGGGACGACCTGTCGCCCGACCTGGACGACG--CT-CCGGAG 6883 Query 52913 CTGCCTGAGCGCCTGCTCCGCCTCATCCGTCGTCCGACCCGGGCGCACGGCGAGGCTGCG 52972 ||||| | ||||| ||||| | || || || ||||| ||||||||||| || Sbjct 6882 CTGCCCGCCACACTGCTGCGCCTGACGCGCCGCCCCGTGCGGGCCCACGGCGAGGCGGCA 6823 Query 52973 GGCCTCGGCGAGCTCACGCCTGAGATGCTCGCCGACACCCTGGAGCAGCTCGACCCGACA 53032 || || ||||||||||| || |||||||| |||| | |||||||| || |||||| Sbjct 6822 GGACTGGGCGAGCTCACCCCCGAGATGCTGGCCGCTTCGCTGGAGCACCTGGACCCGTGC 6763 Query 53033 GAGTTCCGCGACCATGACACG---TGGCGCGACCTGATGATGGCCTGCCACCACGCCACG 53089 || |||| ||||| ||| || |||| ||||||||||||||||||||||||||| Sbjct 6762 GACTTCCAGGACCACGACTCGCAGTGGCTGCCGCTGATGATGGCCTGCCACCACGCCACG 6703 Query 53090 AACGGCGAGGGGCGGCAGGAGTTCATTGACTGGTCCACGCAAGACCTGCAGTACGTGGAC 53149 |||||||||||||||||||||||||| |||||||||||||| |||| || ||| |||| Sbjct 6702 AACGGCGAGGGGCGGCAGGAGTTCATCGACTGGTCCACGCAGGACCCGCGCTACTCGGAC 6643 Query 53150 GACGCCTGGATCATCGGCCGCCGGTGGGACTCGCTGCACGCCA---CATCCGGCCG-CGG 53205 |||||||||| |||||||||||||||||||| |||||||||| | |||| | ||| Sbjct 6642 GACGCCTGGACGATCGGCCGCCGGTGGGACTCTCTGCACGCCAGCCCGACCGGGGGACGG 6583 Query 53206 CGGT--CGCCCCGTCACGATCAAGTTCCTGCATAAGGTCGTCCAGGAAGCGGGCGGTGAG 53263 ||| |||||||| || | ||||||||||| |||||||| ||||| |||||||| || Sbjct 6582 CGGGGCCGCCCCGTGACCGTGAAGTTCCTGCACAAGGTCGTGCAGGACGCGGGCGGCCAG 6523 Query 53264 GTTGCGCGCGTCGAGCCGGAGGACGACTTCGACCCGTGGGAGGACCCCGACGAGGCCGGC 53323 || |||||| |||| ||||||||||||||||| |||||||||| || || || || Sbjct 6522 GTCGCGCGCCCCGAGGCGGAGGACGACTTCGACGCGTGGGAGGAACCGGAGGACCTGGGG 6463 Query 53324 CTGGGCGTGGACGACGCCCTGCTGCGCGAGCCGCCGAAGGCCGAGGGCGTCGAGGCGGTG 53383 | |||||||||||||| ||||||||||||||||| |||||||||| ||| || || Sbjct 6462 CGCGGCGTGGACGACGCGGCGCTGCGCGAGCCGCCGAGGGCCGAGGGCATCGCCGCCGTC 6403 Query 53384 CTCGAGGAGATGAACGAGCAGCACTGCGTCGTGATGGAGGGCGGCAAGTTCCGCATCTTC 53443 ||||||||||||||| | ||||| ||||| | |||| ||| ||||| || || Sbjct 6402 ATCGAGGAGATGAACGCCCGGCACTACGTCGCGCTGGACAACGG---GTTCCAGGTCGTC 6346 Query 53444 ACCGAGGAGATGGACCCCGTCCTG---GGCCGGCCGTTCTTCCAGCGCTCCACCAAGGAG 53500 |||||| || |||||| || | ||||| | || ||||||| | ||| Sbjct 6345 ACCGAGCAGCCGGACCCGATCTTCAACGGCCGCGTGCGCTACCAGCGCATGTCGAAGAGC 6286 Query 53501 GACTTCGAGAACCTG-TACTGCAACCAGCTGATCGAGCTCCACGACAAGCTGGTCACGAA 53559 |||||| | ||| ||| |||||||| |||||| | ||||||||||| | | | Sbjct 6285 GACTTCC-GCTCCTCCTACGAGAACCAGCTCGTCGAGCACAACGACAAGCTGATGAGCAG 6227 Query 53560 GTCC-AGCTACTGGATCAGGAACCCGCGCCGCCGCCAGTACAAGGGCGTCATCTTCGACC 53618 | || | ||| ||| |||||| ||||| ||||||| ||||||||| |||||||||||| Sbjct 6226 GGCCGACCTA-TGGCTCAGGAGCCCGCACCGCCGCACCTACAAGGGCATCATCTTCGACC 6168 Query 53619 C------CGAGCGGCACCACGAGGGCTGGCTCAACCTGTGGCGCGGCTGGGCCGTGCAGC 53672 | ||||| | | |||||||||||||||||| ||||| |||||| |||| ||| Sbjct 6167 CGGCGCGCGAGCAGGAGCACGAGGGCTGGCTCAACATGTGGAAGGGCTGGTCCGTCGAGC 6108 Query 53673 CCCGCAAGGGTGACTGGTCGATGCTGCAGCAGCTCATCCGCGATGTCCTGGTCGACGGCG 53732 | | ||| ||||||||| |||||| |||||||||| || || || |||||||| Sbjct 6107 CGAGGCCGGGCGACTGGTCGCTGCTGCGCGAGCTCATCCGTGACGTGCTCACCGACGGCG 6048 Query 53733 TGGAGGACCACTACGAGTACGTGCTCAACTGGCTGGCCTACATGGTCCAGCACCCTAGCC 53792 | | | | |||||||||||| |||||| |||||| |||| |||||||||| Sbjct 6047 ATGCCGCCTCGTTCGAGTACGTGCTGAACTGGATGGCCTTCATGTTCCAGCACCCCGAGA 5988 Query 53793 GTGCCGCCGAGGTCGCCATGTGCTTCAAGGGTGAGAAGGGCACGGGCAAGGGCACCCTGG 53852 | | ||| |||||||| || ||||| ||| | |||||||||||||||| |||| || | Sbjct 5987 GGGTCGCGGAGGTCGCGATCGCCTTCAGGGGCGCGAAGGGCACGGGCAAGAGCACGCTCG 5928 Query 53853 GCAGGGCGGCCGCGATGCTCGCCGGGGCGCATGGCCTGCACATCAGCTCGCCGGAGCACC 53912 || ||||| ||| | |||||| |||||| |||||||||||| | ||| ||| | Sbjct 5927 GCCGGGCGCTCGCCAAGCTCGCGGGGGCGAGCGGCCTGCACATCGCCAACCCGTCGCAGC 5868 Query 53913 TCGTCGGGCGGTTCAACTCGCACCTGCAGAACTGCATCTGCCTGTTCGCCGACGAGGCCT 53972 |||| ||| |||||||||| ||||| |||||||||||| |||||||| |||||||| | Sbjct 5867 TCGTGGGGAGGTTCAACTCCCACCTCCAGAACTGCATCCTGCTGTTCGCGGACGAGGCGT 5808 Query 53973 TCTGGGCAGGTGATAAGGCAGGCGAGGCGAAGCTCAAGCAGCTAGTGACCGAGCCCACGA 54032 ||||||| || || ||||| |||||| || ||| ||| ||| ||||| ||||| ||| Sbjct 5807 TCTGGGCCGGCGACAAGGCGGGCGAGTCGGTGCTGAAGGCGCTCGTGACGGAGCCGACGC 5748 Query 54033 TCGCCTATGAGGGCAAGGGCCGCGACGCCGTGATGGGCAAGAACCACGTCCACATCATTA 54092 | ||| ||||||||||||||||||||||||||||||| ||||||||| |||||| | | Sbjct 5747 TGATCTACGAGGGCAAGGGCCGCGACGCCGTGATGGGCAGGAACCACGTGCACATCGTCA 5688 Query 54093 TGGCGGCGAATGGCGACTGGGTCGTGCCGGCAGGCCTGGACGGCGAGCGGCGCTTCGCGG 54152 |||| | || |||||||||||||||||| ||| ||||||||||||| || ||||||| Sbjct 5687 TGGCATCCAACAACGACTGGGTCGTGCCGGCCGGCATGGACGGCGAGCGCCGGTTCGCGG 5628 Query 54153 TCTTCCAGGTCAACTCGTCCAGGCGGGGCGACAAGGCCTTCTTCAAGGCGCTGAACCACC 54212 | ||| | |||||| | |||| ||||||||||| |||||| | ||||| |||| || Sbjct 5627 TGTTCAACGTCAACGAGCGGCGGCGCGGCGACAAGGCGTTCTTCGACGCGCTCAACCTCC 5568 Query 54213 AGATGTACCACGCCGGCGGGATCGAGGCCATGCTCTTCGACCTGCTCGCCCGTGACATCG 54272 || | | ||| ||||| ||| || | | | |||| |||| |||| ||| | | Sbjct 5567 AGCT---CAACGGGGGCGGCCTCGCGGGCCTATTGCACGACATGCTGACCCGCGACCTGG 5511 Query 54273 AGGGCTGGGCGCCGCGTGACGAG-GTACCGGCGACCTCCGCCCTGGTGGACCAGAAGGTC 54331 | |||| ||||| || ||| || ||| |||| ||||||| ||| |||||| || Sbjct 5510 GCGACTGGCACCCGCGCGA-GAGCGTGCCGCAGACCGAGGCCCTGGCGGAGCAGAAGCTC 5452 Query 54332 ATGACCATGGACGACGTGGAGCGGTGGTGGTAC 54364 |||| | | || || |||| |||||| || Sbjct 5451 ATGAGCCAGAGCGCCGAGGAGTCCTGGTGGGAC 5419 >seq171395 Length=4653 Score = 179 bits (198), Expect = 1e-40 Identities = 242/333 (73%), Gaps = 8/333 (2%) Strand=Plus/Plus Query 52436 GCAGGCCTCCAGCTCATTCCACTGCACCGGTGGGACGCCAAGGACCAACGCGGCCGAGAC 52495 || ||||| ||| || || |||||| || ||||||| ||| |||||| | | Sbjct 4325 GCTGGCCTGACGCTGATCCCGCTGCACAGGCATGACGCCACCGACTCGCGCGGCAGGCAG 4384 Query 52496 CGTGGCAAGACACCCCGCGATGGCGCGTGGCAGGCCCGCGAGTATGACAGCAGGGCCGTG 52555 || || ||| | || ||||| ||||| |||||| | | || || ||| | | |||||| Sbjct 4385 CGGGGGAAGTCGCCGCGCGACGGCGCCTGGCAGTCGAGGGACTACGACTCCCGCGCCGTG 4444 Query 52556 GCCGAGCTGGCCAACCGCGACGGGATC-AACGTCGGCGTGCGCCTG---CCGGACTCCAT 52611 | || | || | |||||| ||| || |||||||||||||||||| |||| | | Sbjct 4445 GTCGCCCGCGCGACCCGCGA-GGGCTCGAACGTCGGCGTGCGCCTGTCGCCGGGGTGGCT 4503 Query 52612 CATGGTTTTGGACGTGGACCCGCGCAACTTCCCCGAGGGGCGCGACTCCCTTGCCGAGCT 52671 | || | ||||||||||| ||| ||||||||||||| |||||| | || |||||||| Sbjct 4504 CGTGCTC---GACGTGGACCCCCGCTACTTCCCCGAGGGCCGCGACCCGCTGGCCGAGCT 4560 Query 52672 GGTCAAGGACATGTCCCTCGACCTCTCGCAGTGCCCCCACACAATCACGGGCTCGGGCGG 52731 ||| ||| | |||||||| ||||| || ||||| | ||||| |||||||| Sbjct 4561 GGTGCGCGACGCGCGGATCGACCTCGCGCAGGCACCGCACACCGTGACGGGGTCGGGCGG 4620 Query 52732 CCATCATTACTGGTTCCGCAAGCCCGCCGACGT 52764 || || ||||||||| ||||||||||||||| Sbjct 4621 GCACCACTACTGGTTCACCAAGCCCGCCGACGT 4653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175852760023340