Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq134661 152 2e-32 >seq134661 Length=10369 Score = 152 bits (168), Expect = 2e-32 Identities = 234/332 (70%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 39429 TGCCGTACGTCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGA 39488 ||||||| || |||||| ||| |||| ||||| || | |||||| || Sbjct 3551 TGCCGTAGGTGATGATCTGGCTGACGCGTTCGCGCCCGTATTTGCGCGCGACGTAGTCGA 3492 Query 39489 TCACGTCGCCACGGCGACGGTCATC--GAAGTCGATGTCCACGTCGGGCATGGAGACGCG 39546 |||| ||| | ||||| | ||| ||| |||||||| | ||||||||| || ||||| Sbjct 3491 TCACTTCGTCGCGGCG--GTCCATGCAGAAATCGATGTCGAAGTCGGGCATCGACACGCG 3434 Query 39547 CTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGAT 39606 || || |||||||| |||||||| | || || || | || |||||||||||||| Sbjct 3433 TTCCGGATTCAGGAAGCGCTCGAACAGCAGGTTGTAGGGCAGCGGATCCAGGTCGGTGAT 3374 Query 39607 CCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACAC 39666 | || || |||| ||||||| || || |||| ||||| || ||||||| | | Sbjct 3373 CTTCAGCGCCCACGCCACCAGCGAACCGGCACCAGAACCACGGCCCGGGCCGATCGGGAT 3314 Query 39667 ACCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCC 39726 || | | ||| |||| |||||||||||| |||| |||||||| ||||| || Sbjct 3313 GCCCTGGTTCTTGCCCCACTGGATGAAGTCGGCCACGATCAGGAAGTAGCCGGGGAAACC 3254 Query 39727 CATCTGGTTGATCATGTCGATCTCGTAGTCGA 39758 ||||| | |||| |||||| |||| | |||| Sbjct 3253 CATCTTGATGATGGTGTCGAGCTCGAATTCGA 3222 Score = 120 bits (132), Expect = 1e-22 Identities = 435/678 (64%), Gaps = 57/678 (8%) Strand=Plus/Minus Query 38308 CTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCGC 38367 |||| ||||| | | ||| ||||| ||| ||| |||| | ||| |||||| Sbjct 4681 CTCGTCGAGGAAGCCGACCACCTTGTCGGTGTTGTCCATGTCCGAAGACAGCGTGGCCGC 4622 Query 38368 CATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTA 38427 |||| ||||||||||||| || ||| || |||| || |||| || || |||| Sbjct 4621 CATGAACTCGGCCGGGTAATGGCGCTTGAGCCACGCGGTCTGGTAACTGACCAGCGCGTA 4562 Query 38428 CGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACAC 38487 || || | ||||| |||||||||| |||| |||||||| | | || ||| | | Sbjct 4561 GGCAGCGGCGTGCGACTTGTTGAAGCCGTAGCCGGCGAACTTCTCCATCAGGTCGAAGAT 4502 Query 38488 CGCC-CGGA--TGGCAGCGTCCGAGTAGCCTCGCTCGCTTGCTCCCTTCTGGAAGTTCAC 38544 | | ||| ||| |||| | ||| | || | || |||| ||||| || | Sbjct 4501 CTCGTCGGCCTTGGGGCCGTC---GACGCCGCCCTTGGCCGCACCCTCGCGGAAGATCTC 4445 Query 38545 GAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGC 38604 | | |||||||| | | ||| |||||||||||| || ||||| || |||||||| Sbjct 4444 GCGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCGCACGACGCAGCAGGTCGGC 4385 Query 38605 CTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGAT 38664 || || | ||| ||| | | |||||||||| || | ||||||||||||||| | Sbjct 4384 GCCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCATCACCTGCTCCTGGTACAC 4325 Query 38665 GATGAGCCCGAAGGTCGGGTCC---AGGAT---CTCGGCCAGCGGCTCCTCCACCTCGGG 38718 |||| ||| |||| |||| ||||| |||| |||| ||||| Sbjct 4324 CATGATGCCGTAGGT---GTCCTTGAGGATGGCTTCGGTGCGCGG---------ATCGGG 4277 Query 38719 GTGGATCGGCGTGATCTCCTGCTGCCCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCC 38778 | || |||| || | |||||||| ||||| ||| ||| | || Sbjct 4276 ATAGA------TGATTTCTTCCTGCCCGTGCTTGC-----GCG-CGTTGAAGGACGGAAT 4229 Query 38779 CATGCCCATCGGACCCGGACGGTACAGCGCCACGACGGCGGAGATGTCCTCGAACTGGTC 38838 || | ||||||| || || |||||||||| ||| | ||| | ||| ||||| |||| Sbjct 4228 CAGGTCCATCGGGCCGGGGCGGTACAGCGACACCAGCGCGATCAGGTCTTCGAAACGGTC 4169 Query 38839 CGG---------CTTCAGCAGGCGGAGCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAA 38889 || |||||||||||| |||||| || | |||| |||||| Sbjct 4168 GGGGCGTGCGTCCTTCAGCAGGCG---------GCGCATGCCGGAGGATTCGAACTGGAA 4118 Query 38890 CACCGAGAGCGTGTCGCCCCTGGCCAGCA---GCTCGTACGTCGCGGGGTCATCCAGCGG 38946 |||| |||| ||| |||| | | || ||| |||| | ||| |||||||| Sbjct 4117 GACCGCACCGGTGTTGCCGTTGGCGAAGATGTCCTTGTAGGTCGGCGCGTCGTCCAGCGG 4058 Query 38947 GATGTTCTCGATGTCGAC 38964 ||| | ||||||| || Sbjct 4057 GATCGCCGCGATGTCCAC 4040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159902432507150