Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_028976.1
Length=50113
Score E
Sequences producing significant alignments: (Bits) Value
seq134661 152 2e-32
>seq134661
Length=10369
Score = 152 bits (168), Expect = 2e-32
Identities = 234/332 (70%), Gaps = 4/332 (1%)
Strand=Plus/Minus
Query 39429 TGCCGTACGTCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGA 39488
||||||| || |||||| ||| |||| ||||| || | |||||| ||
Sbjct 3551 TGCCGTAGGTGATGATCTGGCTGACGCGTTCGCGCCCGTATTTGCGCGCGACGTAGTCGA 3492
Query 39489 TCACGTCGCCACGGCGACGGTCATC--GAAGTCGATGTCCACGTCGGGCATGGAGACGCG 39546
|||| ||| | ||||| | ||| ||| |||||||| | ||||||||| || |||||
Sbjct 3491 TCACTTCGTCGCGGCG--GTCCATGCAGAAATCGATGTCGAAGTCGGGCATCGACACGCG 3434
Query 39547 CTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGAT 39606
|| || |||||||| |||||||| | || || || | || ||||||||||||||
Sbjct 3433 TTCCGGATTCAGGAAGCGCTCGAACAGCAGGTTGTAGGGCAGCGGATCCAGGTCGGTGAT 3374
Query 39607 CCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACAC 39666
| || || |||| ||||||| || || |||| ||||| || ||||||| | |
Sbjct 3373 CTTCAGCGCCCACGCCACCAGCGAACCGGCACCAGAACCACGGCCCGGGCCGATCGGGAT 3314
Query 39667 ACCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCC 39726
|| | | ||| |||| |||||||||||| |||| |||||||| ||||| ||
Sbjct 3313 GCCCTGGTTCTTGCCCCACTGGATGAAGTCGGCCACGATCAGGAAGTAGCCGGGGAAACC 3254
Query 39727 CATCTGGTTGATCATGTCGATCTCGTAGTCGA 39758
||||| | |||| |||||| |||| | ||||
Sbjct 3253 CATCTTGATGATGGTGTCGAGCTCGAATTCGA 3222
Score = 120 bits (132), Expect = 1e-22
Identities = 435/678 (64%), Gaps = 57/678 (8%)
Strand=Plus/Minus
Query 38308 CTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCGC 38367
|||| ||||| | | ||| ||||| ||| ||| |||| | ||| ||||||
Sbjct 4681 CTCGTCGAGGAAGCCGACCACCTTGTCGGTGTTGTCCATGTCCGAAGACAGCGTGGCCGC 4622
Query 38368 CATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTA 38427
|||| ||||||||||||| || ||| || |||| || |||| || || ||||
Sbjct 4621 CATGAACTCGGCCGGGTAATGGCGCTTGAGCCACGCGGTCTGGTAACTGACCAGCGCGTA 4562
Query 38428 CGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACAC 38487
|| || | ||||| |||||||||| |||| |||||||| | | || ||| | |
Sbjct 4561 GGCAGCGGCGTGCGACTTGTTGAAGCCGTAGCCGGCGAACTTCTCCATCAGGTCGAAGAT 4502
Query 38488 CGCC-CGGA--TGGCAGCGTCCGAGTAGCCTCGCTCGCTTGCTCCCTTCTGGAAGTTCAC 38544
| | ||| ||| |||| | ||| | || | || |||| ||||| || |
Sbjct 4501 CTCGTCGGCCTTGGGGCCGTC---GACGCCGCCCTTGGCCGCACCCTCGCGGAAGATCTC 4445
Query 38545 GAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGC 38604
| | |||||||| | | ||| |||||||||||| || ||||| || ||||||||
Sbjct 4444 GCGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCGCACGACGCAGCAGGTCGGC 4385
Query 38605 CTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGAT 38664
|| || | ||| ||| | | |||||||||| || | ||||||||||||||| |
Sbjct 4384 GCCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCATCACCTGCTCCTGGTACAC 4325
Query 38665 GATGAGCCCGAAGGTCGGGTCC---AGGAT---CTCGGCCAGCGGCTCCTCCACCTCGGG 38718
|||| ||| |||| |||| ||||| |||| |||| |||||
Sbjct 4324 CATGATGCCGTAGGT---GTCCTTGAGGATGGCTTCGGTGCGCGG---------ATCGGG 4277
Query 38719 GTGGATCGGCGTGATCTCCTGCTGCCCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCC 38778
| || |||| || | |||||||| ||||| ||| ||| | ||
Sbjct 4276 ATAGA------TGATTTCTTCCTGCCCGTGCTTGC-----GCG-CGTTGAAGGACGGAAT 4229
Query 38779 CATGCCCATCGGACCCGGACGGTACAGCGCCACGACGGCGGAGATGTCCTCGAACTGGTC 38838
|| | ||||||| || || |||||||||| ||| | ||| | ||| ||||| ||||
Sbjct 4228 CAGGTCCATCGGGCCGGGGCGGTACAGCGACACCAGCGCGATCAGGTCTTCGAAACGGTC 4169
Query 38839 CGG---------CTTCAGCAGGCGGAGCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAA 38889
|| |||||||||||| |||||| || | |||| ||||||
Sbjct 4168 GGGGCGTGCGTCCTTCAGCAGGCG---------GCGCATGCCGGAGGATTCGAACTGGAA 4118
Query 38890 CACCGAGAGCGTGTCGCCCCTGGCCAGCA---GCTCGTACGTCGCGGGGTCATCCAGCGG 38946
|||| |||| ||| |||| | | || ||| |||| | ||| ||||||||
Sbjct 4117 GACCGCACCGGTGTTGCCGTTGGCGAAGATGTCCTTGTAGGTCGGCGCGTCGTCCAGCGG 4058
Query 38947 GATGTTCTCGATGTCGAC 38964
||| | ||||||| ||
Sbjct 4057 GATCGCCGCGATGTCCAC 4040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159902432507150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |