Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028978.1 Length=60609 Score E Sequences producing significant alignments: (Bits) Value seq161357 98.7 4e-16 >seq161357 Length=2110 Score = 98.7 bits (108), Expect = 4e-16 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 54896 CAGACGCTTGCGCAG--GCGCAGCAGATCGCCGATCTGCCTTTCGTCTATCCGCATGTGG 54953 ||| | | || |||| ||||| || |||||| | || |||||| || |||| Sbjct 1396 CAGGCCCATGAGCAGCTGCGCAACA--TCGCCGCCATTCCATTCGTCGGGCCCTGGGTGG 1453 Query 54954 CGCTGATGCCCGATGCGCATTTCGGCAAGGGCAGCAGTGTCGGCACGGTGATCCCGACCG 55013 | ||||||| || | ||| | || |||||| | |||||| |||||||||||||| Sbjct 1454 CCGTGATGCCGGACGTGCACCTGGGAAAGGGCGCGACCGTCGGCTCGGTGATCCCGACCC 1513 Query 55014 AGGGCGCCGTCATTCCCGCCGCGGTGGGTGTCGATATTGGCTGCGGCATGATCGCGGCCC 55073 || || ||||||| || |||||||| || || || |||||||||||| ||||| | Sbjct 1514 GCGGAGCGATCATTCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGCATGGCCGCGGTGC 1573 Query 55074 GCACCACG-TACACGGCGAACGATCT 55098 |||| ||| | || ||| ||||| || Sbjct 1574 GCACGACGCTGCA-GGCCAACGACCT 1598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193418876473102