Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq164418 309 1e-79 >seq164418 Length=2565 Score = 309 bits (342), Expect = 1e-79 Identities = 555/800 (69%), Gaps = 37/800 (5%) Strand=Plus/Plus Query 66111 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66170 || ||| ||| ||||||||||||| |||| |||||| |||||||||||||| || Sbjct 663 CTCGACATCGCATTGGGCATCGGGGGTCTGCCGAAGGGCCGCGTGGTGGAAATCTATGGA 722 Query 66171 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCCCAGAAGGCC 66230 || || || || || ||| | || ||| || || || | ||| | ||||||| Sbjct 723 CCGGAGTCCTCGGGCAAGACCACGCTGACGCTGCAGGCCATCGCCGAGTGCCAGAAGATG 782 Query 66231 GGTGGCAACGCTGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTA---CGCCAAG 66287 || |||| |||||||| |||||| || |||||| | || ||||| || |||||| Sbjct 783 GGAGGCACCGCTGCCTTCATCGATGCCGAGCACGCTCTCGACCCGATCTATGCCGCCAA- 841 Query 66288 GCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCC 66347 ||| || ||| || | ||| | || || || ||||| || || || || ||||| Sbjct 842 --GCTTGGCGTGAACGTGGACGATCTGCTGCTGTCGCAGCCCGATACCGGTGAACAGGCA 899 Query 66348 CTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCT 66407 |||| |||| ||| | || ||| || ||| | || |||| | || | ||||| Sbjct 900 TTGGAAATCGCCGACATGCTGGTCCGTTCCGGCTCGGTGGACATCCTGGTGATCGACTCG 959 Query 66408 GTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA-CAGTCACGTCGG 66466 || ||||| || ||| ||||| |||| ||||| || || || |||| | || Sbjct 960 GTCGCGGCATTGACCCCGAAGGCCGAAATCGAGGGCGAGATGGGCGACCAGTTGC-CGGG 1018 Query 66467 CCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCAC 66526 ||||| || ||||| ||| ||||| |||| ||||| ||||||| |||| || | Sbjct 1019 TCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGTAAGCTGACCGGCAACATCAAGCGCTC 1078 Query 66527 CAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGC------AACGTGGG 66580 ||||||||| | ||| |||||||| ||||| |||||||||| | ||| Sbjct 1079 GAACACGCTGGTGATCTTCATCAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGG 1138 Query 66581 CTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCG 66640 | | ||||| |||||||||||||| ||||| || ||| |||||| ||||| ||||| Sbjct 1139 CCAGAGCCCG---GAGACCACCACGGGTGGCAACGCGCTGAAGTTCTATGCCTCGGTCCG 1195 Query 66641 CATGGATGTCCGTCGCATC---GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCG 66697 |||| |||| |||||| |||| | ||||| ||||||||| |||| |||| Sbjct 1196 TCTGGACATCCGCCGCATCGGTGCCATCAAGAAG---GGCGATGAGATCATCGGTAACCA 1252 Query 66698 CACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCGAGT--TC 66755 ||| | | |||||||||||||||||||||||||||||| | | || | || || Sbjct 1253 GACCAAGATCAAGGTCGTCAAGAACAAGCTGGCCCCGCCGTTC----AAGCAG-GTAATC 1307 Query 66756 TCCG---TCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTG 66812 ||| || |||| || || |||||| ||||| | ||||| ||||| ||| |||| Sbjct 1308 ACCGAGATCCTGTATGGCGAAGGCATCAGCCGTGAAGGTGAACTGATCGACATGGGCGTG 1367 Query 66813 --TCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCG 66870 | || | ||||| ||||| | || ||||||| || || || || || | ||| Sbjct 1368 GATGCCAAG--CTGGTCGAGAAGGCCGGTGCCTGGTACAGCTATGGCGAAGAGCGCATCG 1425 Query 66871 CCCAGGGCAAGCCCAAGGCC 66890 |||||||||| ||| ||| Sbjct 1426 GCCAGGGCAAGGACAACGCC 1445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240439026483300