Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq18562 340 2e-88
seq145711 150 2e-31
>seq18562
Length=18598
Score = 340 bits (376), Expect = 2e-88
Identities = 592/859 (69%), Gaps = 9/859 (1%)
Strand=Plus/Plus
Query 34088 CCGCATGGGGAGTGGCAGTATCTGTATCAGGTGGCGCGGATCCTCAGGGAGGGCTACCGG 34147
||||| |||||| |||||| ||| ||| | | || ||||| | |||| |||
Sbjct 12120 CCGCACGGGGAGCTGCAGTACCTGGGGCAGATTGAGCACGTCCTCCGTTGTGGCTTCCGA 12179
Query 34148 AAGGGGGACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAAC 34207
|||| ||||| || || || || ||||| || |||||| || | ||| | |||| |
Sbjct 12180 AAGGATGACCGCACAGGCACCGGCACCCTGTCGGTGTTCAGCGTGCGGGCGAGCTACAGC 12239
Query 34208 CTTCGGGGCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAG 34267
|| | | |||||||| |||||||| || ||| |||||| ||||||||| | | |||
Sbjct 12240 CTGAGAGATGAATTTCCTCTGCTGACAACCAAATGTGTGTTCTGGAAGGGGATTTTGGAG 12299
Query 34268 GAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTG 34327
|||||||||||||| | | || |||| || | || || || || || |||| |||
Sbjct 12300 GAGCTGCTGTGGTTTATCAACGGATCCACAAATGCTAAAGAACTGTCAACCAGGGGAGTG 12359
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387
|| |||||||| || | |||||||| ||||| ||||| | || ||| | |
Sbjct 12360 AAAATCTGGGATGCCAATGGGTCTCGTGACTTCCTGGATGGCCTTGGATTCTCTAGCAGA 12419
Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447
| ||||| || || ||||| || || || || |||||||| || |||||||| || ||
Sbjct 12420 AAAGAGGGGGATTTAGGCCCAGTTTA-GGCTTTCAGTGGAGGCATTTTGGGGCAGAATAC 12478
Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGAC 34507
| || | || ||||| || || |||| || ||| ||||| | ||||| |||
Sbjct 12479 AAAAATATGGATTCAGATTATTCAGGTCAAGGAGTGGGCCAACTGCAAAAGGTGATTGAC 12538
Query 34508 ACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGAT 34567
| | || || ||| ||||||||| ||| | |||| || ||||| || || |||
Sbjct 12539 ATGATCAAAACCAAACCTACTGACAGAAGAATCATTCTGTGTGCTTGGAATCCAAAAGAT 12598
Query 34568 CTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT-----CG--- 34619
|| ||| | ||||| || || || ||||| |||| ||||| |||||||| ||
Sbjct 12599 CTTCCTTTCATGGCCCTACCTCCATGCCATGCCCTTTGCCAGTTCTACGTGTCTACGTGA 12658
Query 34620 CGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGC 34679
|||||||||||||||||||||||| || || | || | ||||||||| | || | |
Sbjct 12659 TGAATGGGGAGCTGTCCTGCCAGCTATACCAGAGGTCAGCAGACATGGGCCTGGGCGCAC 12718
Query 34680 CGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGG 34739
| |||||||| | || ||| | |||||||| |||||||||| || || |||| |
Sbjct 12719 CCTTCAACATCTCCAGCTACTCCCTGCTCACCCACATGATCGCACACATCATGGGCCTAA 12778
Query 34740 TTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799
|| || || | || || || ||||| ||||| || | |||||||| || | ||||
Sbjct 12779 AGCCAGGTGACTTTGTACACACTTTGGGAGATGCACACGTTTACCTGAATCATACTGAGC 12838
Query 34800 GGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAG 34859
||| | ||||| || |||| || |||| |||| |||||||||| |||||
Sbjct 12839 CGCTGAAACTGCAGCTTCAGTGAGAACCAAGACCTTTCCTGAAGCTCAAAATCCTTCGAA 12898
Query 34860 CCGTCACCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGGAAGGGTACCGGCCGC 34919
|| |||| |||||||| ||| || ||||| | | ||||| ||| || |
Sbjct 12899 AAGTTGAGGCAATTGATGACTTCAGGGCTGAAGACTTTCAGATTGAAGGATACAATCCCC 12958
Query 34920 ACTCGGCCCTGAAGATGGA 34938
|| || | | || |||||
Sbjct 12959 ACCCGACTATTAAAATGGA 12977
Score = 340 bits (376), Expect = 2e-88
Identities = 592/859 (69%), Gaps = 9/859 (1%)
Strand=Plus/Minus
Query 6407 TCCATCTTCAGGGCCGAGTGCGGCCGGTACCCTTCCAACACGAAGTCCTCGCTCCTAAAG 6466
||||| || | | || ||| || ||| ||||| | | ||||| || ||| |||
Sbjct 12977 TCCATTTTAATAGTCGGGTGGGGATTGTATCCTTCAATCTGAAAGTCTTCAGCCCTGAAG 12918
Query 6467 TCATCGATTGAGGTGACGGCTCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGT 6526
||||| |||| || ||||| |||||||||| |||| |||| || ||||
Sbjct 12917 TCATCAATTGCCTCAACTTTTCGAAGGATTTTGAGCTTCAGGAAAGGTCTTGGTTCTCAC 12858
Query 6527 TGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTA 6586
|| ||||| | ||| |||| | || |||||||| | || ||||| ||||| ||
Sbjct 12857 TGAAGCTGCAGTTTCAGCGGCTCAGTATGATTCAGGTAAACGTGTGCATCTCCCAAAGTG 12798
Query 6587 TGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCG 6646
|| || | || || || | |||| || || |||||||||| |||||||| | |
Sbjct 12797 TGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGCGATCATGTGGGTGAGCAGGGAG 12738
Query 6647 TAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGG 6706
|| || | |||||||| || | || | ||||||||| | || | || || ||||||
Sbjct 12737 TAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTGG 12678
Query 6707 CAGGACAGCTCCCCATTCG---CG-----ACGTAGAATTGGCAGAGGGTGTGGCACGGGG 6758
|||||||||||||||||| || |||||||| ||||| |||| ||||| || |
Sbjct 12677 CAGGACAGCTCCCCATTCATCACGTAGACACGTAGAACTGGCAAAGGGCATGGCATGGAG 12618
Query 6759 GGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCAT 6818
| || ||||| | ||| ||||| || || ||||| || |||| | ||| |||||||||
Sbjct 12617 GTAGGGCCATGAAAGGAAGATCTTTTGGATTCCAAGCACACAGAATGATTCTTCTGTCAG 12558
Query 6819 CAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAAT 6878
||| || || | |||| ||||| | ||||| ||| || |||| || || ||||
Sbjct 12557 TAGGTTTGGTTTTGATCATGTCAATCACCTTTTGCAGTTGGCCCACTCCTTGACCTGAAT 12498
Query 6879 AGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCG 6938
| || | || | || || |||||||| || |||||||| || || || || |
Sbjct 12497 AATCTGAATCCATATTTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCC-TAAACTG 12439
Query 6939 GGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACC 6998
|||| || || ||||| | | | ||| || | ||||| ||||| |||||||
Sbjct 12438 GGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCCAAGGCCATCCAGGAAGTCACGAGACC 12379
Query 6999 CGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCC 7058
| | || |||||||| ||||| |||| || || || || || | || |||| ||
Sbjct 12378 CATTGGCATCCCAGATTTTCACTCCCCTGGTTGACAGTTCTTTAGCATTTGTGGATCCGT 12319
Query 7059 TCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCA 7118
| | ||||||||||||||||| | | ||||||||| |||||| ||| || |||||||
Sbjct 12318 TGATAAACCACAGCAGCTCCTCCAAAATCCCCTTCCAGAACACACATTTGGTTGTCAGCA 12259
Query 7119 GCGGAAATTCGCCCCGAAGGTTGTATCGGGCCTGTGTGCCGAACACGGAGAGGGTCCCCG 7178
| |||||||| | | ||| |||| | ||| | || |||||| || ||||| || |
Sbjct 12258 GAGGAAATTCATCTCTCAGGCTGTAGCTCGCCCGCACGCTGAACACCGACAGGGTGCCGG 12199
Query 7179 TCCCGGTCCGGTCCCCCTTCCGGTAGCCCTCCCTGAGGATCCGCGCCACCTGATACAGAT 7238
| || || ||||| |||| ||| |||| | ||||| || | | ||| ||| |
Sbjct 12198 TGCCTGTGCGGTCATCCTTTCGGAAGCCACAACGGAGGACGTGCTCAATCTGCCCCAGGT 12139
Query 7239 ACTGCCACTCCCCATGCGG 7257
||||| |||||| |||||
Sbjct 12138 ACTGCAGCTCCCCGTGCGG 12120
>seq145711
Length=17273
Score = 150 bits (166), Expect = 2e-31
Identities = 130/161 (81%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| ||||||||||| |||||||| | ||| || || |||||||| ||||| || | |||
Sbjct 11207 TGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCC 11266
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|||||| | || | || || |||||||||||||||||||||||| | |||||||| |||
Sbjct 11267 ATGTCTGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCACCACGTAGAACTGG 11326
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||||| ||||| || || || ||||| | ||| |||||
Sbjct 11327 CAGAGGGCATGGCAGGGAGGTAGGGCCATGAAAGGAAGATC 11367
Score = 150 bits (166), Expect = 2e-31
Identities = 130/161 (81%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| ||| | ||||| || || || ||||| |||||||||| |||||||| | ||||
Sbjct 11367 GATCTTCCTTTCATGGCCCTACCTCCCTGCCATGCCCTCTGCCAGTTCTACGTGGTGAAT 11308
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|||||||||||||||||||| || || | || | ||||||||| | || ||||| |||
Sbjct 11307 GGGGAGCTGTCCTGCCAGCTATACCAGAGGTCAGCAGACATGGGCCTGGGCGTGCCCTTC 11248
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || ||| | |||||||| ||||||||||| ||
Sbjct 11247 AACATCGCCAGCTACTCCCTGCTCACCTACATGATCGCACA 11207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447268372524720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |