Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq18562 340 2e-88 seq145711 150 2e-31 >seq18562 Length=18598 Score = 340 bits (376), Expect = 2e-88 Identities = 592/859 (69%), Gaps = 9/859 (1%) Strand=Plus/Plus Query 34088 CCGCATGGGGAGTGGCAGTATCTGTATCAGGTGGCGCGGATCCTCAGGGAGGGCTACCGG 34147 ||||| |||||| |||||| ||| ||| | | || ||||| | |||| ||| Sbjct 12120 CCGCACGGGGAGCTGCAGTACCTGGGGCAGATTGAGCACGTCCTCCGTTGTGGCTTCCGA 12179 Query 34148 AAGGGGGACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAAC 34207 |||| ||||| || || || || ||||| || |||||| || | ||| | |||| | Sbjct 12180 AAGGATGACCGCACAGGCACCGGCACCCTGTCGGTGTTCAGCGTGCGGGCGAGCTACAGC 12239 Query 34208 CTTCGGGGCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAG 34267 || | | |||||||| |||||||| || ||| |||||| ||||||||| | | ||| Sbjct 12240 CTGAGAGATGAATTTCCTCTGCTGACAACCAAATGTGTGTTCTGGAAGGGGATTTTGGAG 12299 Query 34268 GAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTG 34327 |||||||||||||| | | || |||| || | || || || || || |||| ||| Sbjct 12300 GAGCTGCTGTGGTTTATCAACGGATCCACAAATGCTAAAGAACTGTCAACCAGGGGAGTG 12359 Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387 || |||||||| || | |||||||| ||||| ||||| | || ||| | | Sbjct 12360 AAAATCTGGGATGCCAATGGGTCTCGTGACTTCCTGGATGGCCTTGGATTCTCTAGCAGA 12419 Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 | ||||| || || ||||| || || || || |||||||| || |||||||| || || Sbjct 12420 AAAGAGGGGGATTTAGGCCCAGTTTA-GGCTTTCAGTGGAGGCATTTTGGGGCAGAATAC 12478 Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGAC 34507 | || | || ||||| || || |||| || ||| ||||| | ||||| ||| Sbjct 12479 AAAAATATGGATTCAGATTATTCAGGTCAAGGAGTGGGCCAACTGCAAAAGGTGATTGAC 12538 Query 34508 ACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGAT 34567 | | || || ||| ||||||||| ||| | |||| || ||||| || || ||| Sbjct 12539 ATGATCAAAACCAAACCTACTGACAGAAGAATCATTCTGTGTGCTTGGAATCCAAAAGAT 12598 Query 34568 CTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT-----CG--- 34619 || ||| | ||||| || || || ||||| |||| ||||| |||||||| || Sbjct 12599 CTTCCTTTCATGGCCCTACCTCCATGCCATGCCCTTTGCCAGTTCTACGTGTCTACGTGA 12658 Query 34620 CGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGC 34679 |||||||||||||||||||||||| || || | || | ||||||||| | || | | Sbjct 12659 TGAATGGGGAGCTGTCCTGCCAGCTATACCAGAGGTCAGCAGACATGGGCCTGGGCGCAC 12718 Query 34680 CGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGG 34739 | |||||||| | || ||| | |||||||| |||||||||| || || |||| | Sbjct 12719 CCTTCAACATCTCCAGCTACTCCCTGCTCACCCACATGATCGCACACATCATGGGCCTAA 12778 Query 34740 TTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799 || || || | || || || ||||| ||||| || | |||||||| || | |||| Sbjct 12779 AGCCAGGTGACTTTGTACACACTTTGGGAGATGCACACGTTTACCTGAATCATACTGAGC 12838 Query 34800 GGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAG 34859 ||| | ||||| || |||| || |||| |||| |||||||||| ||||| Sbjct 12839 CGCTGAAACTGCAGCTTCAGTGAGAACCAAGACCTTTCCTGAAGCTCAAAATCCTTCGAA 12898 Query 34860 CCGTCACCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGGAAGGGTACCGGCCGC 34919 || |||| |||||||| ||| || ||||| | | ||||| ||| || | Sbjct 12899 AAGTTGAGGCAATTGATGACTTCAGGGCTGAAGACTTTCAGATTGAAGGATACAATCCCC 12958 Query 34920 ACTCGGCCCTGAAGATGGA 34938 || || | | || ||||| Sbjct 12959 ACCCGACTATTAAAATGGA 12977 Score = 340 bits (376), Expect = 2e-88 Identities = 592/859 (69%), Gaps = 9/859 (1%) Strand=Plus/Minus Query 6407 TCCATCTTCAGGGCCGAGTGCGGCCGGTACCCTTCCAACACGAAGTCCTCGCTCCTAAAG 6466 ||||| || | | || ||| || ||| ||||| | | ||||| || ||| ||| Sbjct 12977 TCCATTTTAATAGTCGGGTGGGGATTGTATCCTTCAATCTGAAAGTCTTCAGCCCTGAAG 12918 Query 6467 TCATCGATTGAGGTGACGGCTCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGT 6526 ||||| |||| || ||||| |||||||||| |||| |||| || |||| Sbjct 12917 TCATCAATTGCCTCAACTTTTCGAAGGATTTTGAGCTTCAGGAAAGGTCTTGGTTCTCAC 12858 Query 6527 TGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTA 6586 || ||||| | ||| |||| | || |||||||| | || ||||| ||||| || Sbjct 12857 TGAAGCTGCAGTTTCAGCGGCTCAGTATGATTCAGGTAAACGTGTGCATCTCCCAAAGTG 12798 Query 6587 TGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCG 6646 || || | || || || | |||| || || |||||||||| |||||||| | | Sbjct 12797 TGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGCGATCATGTGGGTGAGCAGGGAG 12738 Query 6647 TAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGG 6706 || || | |||||||| || | || | ||||||||| | || | || || |||||| Sbjct 12737 TAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTGG 12678 Query 6707 CAGGACAGCTCCCCATTCG---CG-----ACGTAGAATTGGCAGAGGGTGTGGCACGGGG 6758 |||||||||||||||||| || |||||||| ||||| |||| ||||| || | Sbjct 12677 CAGGACAGCTCCCCATTCATCACGTAGACACGTAGAACTGGCAAAGGGCATGGCATGGAG 12618 Query 6759 GGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCAT 6818 | || ||||| | ||| ||||| || || ||||| || |||| | ||| ||||||||| Sbjct 12617 GTAGGGCCATGAAAGGAAGATCTTTTGGATTCCAAGCACACAGAATGATTCTTCTGTCAG 12558 Query 6819 CAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAAT 6878 ||| || || | |||| ||||| | ||||| ||| || |||| || || |||| Sbjct 12557 TAGGTTTGGTTTTGATCATGTCAATCACCTTTTGCAGTTGGCCCACTCCTTGACCTGAAT 12498 Query 6879 AGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCG 6938 | || | || | || || |||||||| || |||||||| || || || || | Sbjct 12497 AATCTGAATCCATATTTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCC-TAAACTG 12439 Query 6939 GGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACC 6998 |||| || || ||||| | | | ||| || | ||||| ||||| ||||||| Sbjct 12438 GGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCCAAGGCCATCCAGGAAGTCACGAGACC 12379 Query 6999 CGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCC 7058 | | || |||||||| ||||| |||| || || || || || | || |||| || Sbjct 12378 CATTGGCATCCCAGATTTTCACTCCCCTGGTTGACAGTTCTTTAGCATTTGTGGATCCGT 12319 Query 7059 TCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCA 7118 | | ||||||||||||||||| | | ||||||||| |||||| ||| || ||||||| Sbjct 12318 TGATAAACCACAGCAGCTCCTCCAAAATCCCCTTCCAGAACACACATTTGGTTGTCAGCA 12259 Query 7119 GCGGAAATTCGCCCCGAAGGTTGTATCGGGCCTGTGTGCCGAACACGGAGAGGGTCCCCG 7178 | |||||||| | | ||| |||| | ||| | || |||||| || ||||| || | Sbjct 12258 GAGGAAATTCATCTCTCAGGCTGTAGCTCGCCCGCACGCTGAACACCGACAGGGTGCCGG 12199 Query 7179 TCCCGGTCCGGTCCCCCTTCCGGTAGCCCTCCCTGAGGATCCGCGCCACCTGATACAGAT 7238 | || || ||||| |||| ||| |||| | ||||| || | | ||| ||| | Sbjct 12198 TGCCTGTGCGGTCATCCTTTCGGAAGCCACAACGGAGGACGTGCTCAATCTGCCCCAGGT 12139 Query 7239 ACTGCCACTCCCCATGCGG 7257 ||||| |||||| ||||| Sbjct 12138 ACTGCAGCTCCCCGTGCGG 12120 >seq145711 Length=17273 Score = 150 bits (166), Expect = 2e-31 Identities = 130/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| | ||| || || |||||||| ||||| || | ||| Sbjct 11207 TGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCC 11266 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||| | || | || || |||||||||||||||||||||||| | |||||||| ||| Sbjct 11267 ATGTCTGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCACCACGTAGAACTGG 11326 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| ||||| || || || ||||| | ||| ||||| Sbjct 11327 CAGAGGGCATGGCAGGGAGGTAGGGCCATGAAAGGAAGATC 11367 Score = 150 bits (166), Expect = 2e-31 Identities = 130/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||| | ||||| || || || ||||| |||||||||| |||||||| | |||| Sbjct 11367 GATCTTCCTTTCATGGCCCTACCTCCCTGCCATGCCCTCTGCCAGTTCTACGTGGTGAAT 11308 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 |||||||||||||||||||| || || | || | ||||||||| | || ||||| ||| Sbjct 11307 GGGGAGCTGTCCTGCCAGCTATACCAGAGGTCAGCAGACATGGGCCTGGGCGTGCCCTTC 11248 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||| | |||||||| ||||||||||| || Sbjct 11247 AACATCGCCAGCTACTCCCTGCTCACCTACATGATCGCACA 11207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447268372524720