Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq41520 192 5e-44 seq85367 122 7e-23 seq18562 118 9e-22 seq145711 91.5 1e-13 >seq41520 Length=21859 Score = 192 bits (212), Expect = 5e-44 Identities = 205/271 (76%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 1260 TGTTTTTTAGAAACGCCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCA 1319 || ||| | ||| | | || ||||| | ||||| |||||||| ||| | || || | Sbjct 20606 TGCTTTCTGGAATCTTCCCAGGAAGTCTTGATTGTGACATGGCAGAAAATCAAGGCCGTA 20547 Query 1320 AGCCCAGAAAACATGGCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATAC 1379 | |||||||||||||| || || || ||||| || |||||||| || ||||| || Sbjct 20546 ACCCCAGAAAACATGGTTACCTTCAGCAATGAACATGGGGTTGTGGTCCAGCCTCGTTAT 20487 Query 1380 AAAGATAAAATGAACATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAAC 1439 || |||| ||||||||||||||||| ||||| | ||| |||| || ||||||||||| Sbjct 20486 AAGAATAAGATGAACATAACTGAGCTGGGACTTCGGAACTCAACCATTACCTTCTGGAAT 20427 Query 1440 ACAACATTGGATGATGAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAG 1499 || || |||| ||||||||||| |||||||| | ||||| ||||| || | |||||| Sbjct 20426 ACCACTCTGGAGGATGAAGGGTGTTACAAGTGCCTCTTTAATACTTTCGGTGCCGGGAAG 20367 Query 1500 ATGTCAGGAATAGGGTGTCTAACCCTTTTTG 1530 || ||||||||| || || || || |||| Sbjct 20366 ATCGCAGGAATAGCCTGCCTCACTCTCTTTG 20336 >seq85367 Length=46346 Score = 122 bits (134), Expect = 7e-23 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||||||| | |||||||| ||||||||| | ||||| || |||||||| Sbjct 118 GTGGTGGAGGAGCTCTTCAGGGATGGGGTGAACTGGGGGAGGATTGTGGCCTTCTTTGAA 177 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || ||||| || ||||||||||| |||||||| | | || | |||| || |||||| Sbjct 178 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 237 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || ||| |||||||||||| Sbjct 238 ATCGCCCTGTGGATGACAGA 257 >seq18562 Length=18598 Score = 118 bits (130), Expect = 9e-22 Identities = 402/622 (65%), Gaps = 21/622 (3%) Strand=Plus/Minus Query 118456 AGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGT 118515 || || |||||||| |||||| | ||||||| || || || ||||| || | || ||| Sbjct 12854 AGCTGCAGTTTCAGCGGCTCAGTATGATTCAGGTAAACGTGTGCATCTCCCAAAGTGTGT 12795 Query 118516 ATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAG 118575 | || ||||| || | || || | | ||| || ||||||| || | || |||| Sbjct 12794 ACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGCGATCATGTGGGTGAGCAGGGAGTAG 12735 Query 118576 CTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAA 118635 |||| | || || || | ||||| |||||||||||||| |||||||| | ||||| Sbjct 12734 CTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTGGCAG 12675 Query 118636 GAGAGCTCCCCGT--------TTGCAACATAAAACTGACTTATGATGTGACATGGAGGCA 118687 || |||||||| | | | || || ||||| | | | || |||||||| | Sbjct 12674 GACAGCTCCCCATTCATCACGTAGACACGTAGAACTGGCAAAGGGCATGGCATGGAGGTA 12615 Query 118688 GAACCATGGAACTCAGTTGGGCAGGATTCCAGGCTGTTAAAACATGCCTTCTGCTATATG 118747 | ||||| || || | |||||||| || | || |||||| | | Sbjct 12614 GGGCCATGAAAGGAAGATCTTTTGGATTCCAAGCACACAGAATGATTCTTCTGTCAGTAG 12555 Query 118748 GTTCTACCTGTATACCCTCAATTAAATTCTGAATCTGATCCACACCCTTTCCAGTATACT 118807 ||| | || ||||| | || || | || |||| || | || | ||| | Sbjct 12554 GTTTGGTTTTGATCATGTCAATCACCTTTTGCAGTTGGCCCACTCCTTGACCTGAATAAT 12495 Query 118808 GAGACTCGCAT-CCTTTATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGC 118866 || || ||| ||| ||||||||||||||| ||||| ||||| || ||||| || Sbjct 12494 CTGAATC-CATATTTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCC-TAAACTGGG 12437 Query 118867 CCCAGATCTCCCTGGGACCT-----AAAATCTAAACCTACTTTTCTCTGAAATTCTTTTG 118921 || | ||| |||| || | |||| || | | || | | || || | Sbjct 12436 CCTAAATCCCCCTCTTTTCTGCTAGAGAATCCAAGGCCA----TC-CAGGAAGTCACGAG 12382 Query 118922 ACCCATTAGCATTCCAAATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAAC 118981 ||||||| |||| ||| || ||||| | ||| ||| || |||| ||||| || | Sbjct 12381 ACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGACAGTTCTTTAGCATTTGTGGATC 12322 Query 118982 CACTTAAAAACCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAA 119041 | | | |||||| || |||||||| | || || |||| || || ||| ||||| | Sbjct 12321 CGTTGATAAACCACAGCAGCTCCTCCAAAATCCCCTTCCAGAACACACATTTGGTTGTCA 12262 Query 119042 ACAGTGGAAACTGACCTCTAAG 119063 ||| ||||| | | |||| || Sbjct 12261 GCAGAGGAAATTCATCTCTCAG 12240 >seq145711 Length=17273 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || || || | ||| || |||||||| || | || ||||||||| | || || || Sbjct 11195 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 11254 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || ||||| |||||||||||||| |||||||| | ||||| || |||||||| || | Sbjct 11255 ACGCCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCACC 11314 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAA 118698 || || ||||| | | | || || ||||| || ||||| || Sbjct 11315 ACGTAGAACTGGCAGAGGGCATGGCAGGGAGGTAGGGCCATGAAA 11359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413580670202164