Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq79216 107 2e-18 seq97981 98.7 9e-16 seq548 98.7 9e-16 seq85393 87.8 2e-12 seq104034 86.0 5e-12 seq94837 84.2 2e-11 seq8818 84.2 2e-11 >seq79216 Length=33065 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 39056 AGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG 39115 |||| ||||| | ||| | |||| || || ||| |||||| || || || || || | Sbjct 3405 AGCCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 3464 Query 39116 CAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGG 39175 ||| || || | || || ||||| ||||| ||||| || || | ||||||||||| || Sbjct 3465 AAAGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGG 3524 Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235 | | || ||||| ||| ||| || || | || | | || ||||||| ||||| Sbjct 3525 GGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCCA 3584 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | |||| ||||| | || || ||||| || || || ||||| ||||| Sbjct 3585 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633 >seq97981 Length=9611 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| |||||| || || || || || | ||| || || || || Sbjct 2486 CACCAACTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTATAATCATCTTC 2545 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||||||||| ||||| | |||||||||||||| | || | || ||| ||||| Sbjct 2546 CAGCTGTTTGCCTGCAAAAACCAGACGCTGCTGGTCAGAAGGGATGCCCTCCTTGTCTTG 2605 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||||| || | | || || || | ||| || || | ||||| | || Sbjct 2606 GATTTTAGCTTTGACAATCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTT 2665 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || ||||| || || ||||||| ||||||| Sbjct 2666 GCCAGTCAGGGTCTTTGCAAAGATCTGCATCT 2697 >seq548 Length=19863 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| |||||| || || || || || | || || | | || || Sbjct 10965 CACCAAGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCCGAGAGAGTGCAGCCATCCTC 10906 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 |||||||||||| |||| || || | ||||||||| |||||| | || ||| ||||| Sbjct 10905 CAGCTGTTTGCCCACAAACATCAGTCACTGCTGGTCAGGTGGG-ATGCCCTCCTTGTCTT 10847 Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 |||||| ||||| || | | || || || | ||| || || | ||||| | | Sbjct 10846 GGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCT 10787 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 | || ||||| || || |||||||| ||||||| Sbjct 10786 TGCCAGTCAGGGTCTTCACAAAGATCTGCATCT 10754 >seq85393 Length=7687 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| |||||| || | || || || | || || || | || || Sbjct 5670 ACCAAGTGCAGAGTGGACTCTTTCTGAGTGTTTTAGTCCGAGAGAGTGCGGCCATCTTCC 5611 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||||||||| ||||| || || ||||||||||| | || | || ||| ||||| | Sbjct 5610 AGCTGTTTGCCTGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTAG 5551 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 ||||| ||||| || | || || || | ||| || || | | |||| | || Sbjct 5550 ATTTTACCTTTGACGTTCTCAGTGGTGTCACTGGGCTCAACCTCAAGCATGATGATCTTG 5491 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || ||||| | || |||||||| ||||||| Sbjct 5490 CCAGTCAGGGCCTTCACAAAGATCTGCATCT 5460 >seq104034 Length=7476 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| |||||| || || | || || || || || | || || Sbjct 2067 CACCAAGTGCAGTGTGGACTCTTTCTGAATGATGTAGTCCAGGAGAGTGCGGCCATCTTC 2008 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||||| ||| ||||| || || ||||||||||| | || | || ||| |||| | Sbjct 2007 CAGCTGTTGGCCTGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTTTTT 1948 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||||| || | || || || | ||| || || | ||||| | || Sbjct 1947 GATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTT 1888 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || ||||| || || |||||||| ||||||| Sbjct 1887 GCCAGTCAGGGTCTTCACAAAGATCTGCATCT 1856 >seq94837 Length=4094 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || ||| || || ||| | || || ||||| ||||| ||||| Sbjct 4094 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAG 4035 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || || ||||||||||| | ||| | || ||| |||||| ||| || |||| ||| Sbjct 4034 ATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 3976 Query 39214 G-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| |||||||| || | ||||| | || ||||| || || || || Sbjct 3975 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 3916 Query 39273 AAAGATTTGCATCTT 39287 || || |||||||| Sbjct 3915 GAAAATCTGCATCTT 3901 >seq8818 Length=48227 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCT----CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGT 39130 |||||| || |||||| |||||| || || || || || | || || || | | Sbjct 8718 CACCAAGTGCAGCGTGGAGGGACTCTTTCTGAATGTTGTAGTCCGAGAGAGTGCGGCCAT 8777 Query 39131 CATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGT 39190 | || ||| ||||||||||||| || || ||||||||||| | || | || ||| |||| Sbjct 8778 CCTCCAGCCGTTTGCCCGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGT 8837 Query 39191 CCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATAC 39250 | |||||| ||||| || | || || || | ||| || || | ||||| Sbjct 8838 CTTGGATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGG 8897 Query 39251 TTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || | ||||| || || |||||||| ||||| Sbjct 8898 TCTTGCTAGTCAGGGTCTTCACAAAGATCTGCAT 8931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428616890331113