Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq79216 107 2e-18
seq97981 98.7 9e-16
seq548 98.7 9e-16
seq85393 87.8 2e-12
seq104034 86.0 5e-12
seq94837 84.2 2e-11
seq8818 84.2 2e-11
>seq79216
Length=33065
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 39056 AGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG 39115
|||| ||||| | ||| | |||| || || ||| |||||| || || || || || |
Sbjct 3405 AGCCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 3464
Query 39116 CAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGG 39175
||| || || | || || ||||| ||||| ||||| || || | ||||||||||| ||
Sbjct 3465 AAAGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGG 3524
Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235
| | || ||||| ||| ||| || || | || | | || ||||||| |||||
Sbjct 3525 GGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCCA 3584
Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| |||| ||||| | || || ||||| || || || ||||| |||||
Sbjct 3585 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633
>seq97981
Length=9611
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| |||||| || || || || || | ||| || || || ||
Sbjct 2486 CACCAACTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTATAATCATCTTC 2545
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||||||||| ||||| | |||||||||||||| | || | || ||| |||||
Sbjct 2546 CAGCTGTTTGCCTGCAAAAACCAGACGCTGCTGGTCAGAAGGGATGCCCTCCTTGTCTTG 2605
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|||||| ||||| || | | || || || | ||| || || | ||||| | ||
Sbjct 2606 GATTTTAGCTTTGACAATCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTT 2665
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
|| ||||| || || ||||||| |||||||
Sbjct 2666 GCCAGTCAGGGTCTTTGCAAAGATCTGCATCT 2697
>seq548
Length=19863
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| |||||| || || || || || | || || | | || ||
Sbjct 10965 CACCAAGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCCGAGAGAGTGCAGCCATCCTC 10906
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193
|||||||||||| |||| || || | ||||||||| |||||| | || ||| |||||
Sbjct 10905 CAGCTGTTTGCCCACAAACATCAGTCACTGCTGGTCAGGTGGG-ATGCCCTCCTTGTCTT 10847
Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|||||| ||||| || | | || || || | ||| || || | ||||| | |
Sbjct 10846 GGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCT 10787
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
| || ||||| || || |||||||| |||||||
Sbjct 10786 TGCCAGTCAGGGTCTTCACAAAGATCTGCATCT 10754
>seq85393
Length=7687
Score = 87.8 bits (96), Expect = 2e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || ||| |||||| || | || || || | || || || | || ||
Sbjct 5670 ACCAAGTGCAGAGTGGACTCTTTCTGAGTGTTTTAGTCCGAGAGAGTGCGGCCATCTTCC 5611
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||||||||| ||||| || || ||||||||||| | || | || ||| ||||| |
Sbjct 5610 AGCTGTTTGCCTGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTAG 5551
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
||||| ||||| || | || || || | ||| || || | | |||| | ||
Sbjct 5550 ATTTTACCTTTGACGTTCTCAGTGGTGTCACTGGGCTCAACCTCAAGCATGATGATCTTG 5491
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
|| ||||| | || |||||||| |||||||
Sbjct 5490 CCAGTCAGGGCCTTCACAAAGATCTGCATCT 5460
>seq104034
Length=7476
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| |||||| || || | || || || || || | || ||
Sbjct 2067 CACCAAGTGCAGTGTGGACTCTTTCTGAATGATGTAGTCCAGGAGAGTGCGGCCATCTTC 2008
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||||| ||| ||||| || || ||||||||||| | || | || ||| |||| |
Sbjct 2007 CAGCTGTTGGCCTGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTTTTT 1948
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|||||| ||||| || | || || || | ||| || || | ||||| | ||
Sbjct 1947 GATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTT 1888
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
|| ||||| || || |||||||| |||||||
Sbjct 1887 GCCAGTCAGGGTCTTCACAAAGATCTGCATCT 1856
>seq94837
Length=4094
Score = 84.2 bits (92), Expect = 2e-11
Identities = 137/195 (70%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153
|| || || || || || ||| || || ||| | || || ||||| ||||| |||||
Sbjct 4094 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAG 4035
Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213
|| || ||||||||||| | ||| | || ||| |||||| ||| || |||| |||
Sbjct 4034 ATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 3976
Query 39214 G-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | | || ||| |||||||| || | ||||| | || ||||| || || || ||
Sbjct 3975 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 3916
Query 39273 AAAGATTTGCATCTT 39287
|| || ||||||||
Sbjct 3915 GAAAATCTGCATCTT 3901
>seq8818
Length=48227
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCT----CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGT 39130
|||||| || |||||| |||||| || || || || || | || || || | |
Sbjct 8718 CACCAAGTGCAGCGTGGAGGGACTCTTTCTGAATGTTGTAGTCCGAGAGAGTGCGGCCAT 8777
Query 39131 CATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGT 39190
| || ||| ||||||||||||| || || ||||||||||| | || | || ||| ||||
Sbjct 8778 CCTCCAGCCGTTTGCCCGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGT 8837
Query 39191 CCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATAC 39250
| |||||| ||||| || | || || || | ||| || || | |||||
Sbjct 8838 CTTGGATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGG 8897
Query 39251 TTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || | ||||| || || |||||||| |||||
Sbjct 8898 TCTTGCTAGTCAGGGTCTTCACAAAGATCTGCAT 8931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428616890331113
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |