Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq161317 113 3e-20 seq79216 98.7 7e-16 seq104034 96.9 2e-15 seq97981 95.1 8e-15 seq94837 89.7 3e-13 seq104553 86.0 4e-12 seq548 84.2 1e-11 seq99161 82.4 5e-11 seq67824 82.4 5e-11 >seq161317 Length=2104 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || ||||| ||||| || ||||| || || || || |||| Sbjct 1304 ATGCAGATTTTTGTGAAGACTCTCACCGGAAAGACCATCACCCTTGAGGTCGAGTCCAGT 1245 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || ||| ||||| || ||| | || || |||||| Sbjct 1244 GACACTATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAA 1185 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || ||||||| | ||||| ||| |||| |||||| Sbjct 1184 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTAAGCGACTACAAC 1125 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 1124 ATTCAGAAGGAGTCAAC 1108 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || ||||| ||||| ||||| || | Sbjct 2042 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 1983 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || | || | || ||||| || || | || || || || Sbjct 1982 GACACTATCGACAATGTCAAGTCCAAGA-TTCAGGACAAGGAGGGCATCCCCCCCGACCA 1924 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || || || || || |||||||| || || || |||| |||||| | |||||||| Sbjct 1923 GCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 1864 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 1863 CATTCAGAAGGAGTCCAC 1846 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || |||||||| ||||| || || ||||| ||||| || || | Sbjct 1532 ATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 1473 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || | | ||||| || ||| | || || ||||| Sbjct 1472 GATACCATTGATAATGTGAAGAGCAAGA-TCCAGGACAAGGAGGGTATTCCTCCCGATCA 1414 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || ||||| ||||| ||||| | || ||| | ||| ||||| Sbjct 1413 ACAGCGACTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGAACTCTTTCCGACTACAA 1354 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || || || || | || || ||| Sbjct 1353 CATTCAGAAGGAATCTACTCTCCACTTGGTT 1323 >seq79216 Length=33065 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || || ||||| || || || || ||||| || || || || || Sbjct 3864 AAAATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCC 3805 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||| ||| | ||| | || | | || || ||||| | || ||||| Sbjct 3804 AGCGACACCATTGAGAATGTGAAAGCCAAGA-TCCAAGATAAGGAAGGCATCCCCCCAGA 3746 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | | || ||||| ||||| || |||||||| | |||||| | || || Sbjct 3745 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTA 3686 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || ||||||||||| Sbjct 3685 CAACATCCAGAAAGAGTCCAC 3665 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| || || || || | | Sbjct 3633 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCGAGC 3574 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | || |||||||| | || || || || Sbjct 3573 GACACCATTGAGAATGTGAAGGCCAAGA-TCCAGGATAAAGAAGGCATCCCCCCCGACCA 3515 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| ||||| || ||||| || | |||||| | || ||||| Sbjct 3514 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGACTACAA 3455 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 3454 CATCCAGAAAGAGTCCAC 3437 >seq104034 Length=7476 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || || || ||||| || || ||||| ||| Sbjct 1858 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 1917 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| ||| ||| | ||| | |||| | |||| || || | ||||| || || Sbjct 1918 GACACCACTGAGAATGTCAAAGCTAAAA-TCAAAAACAAGGAGGGCATCCCGCCTGACCA 1976 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||| ||| |||| |||||||| | |||||| | || |||| Sbjct 1977 GCAGCGACTGATTTTTGCAGGCCAACAGCTGGAAGATGGCCGCACTCTCCTGGACTACAT 2036 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || |||||||||||| | || || || Sbjct 2037 CATTCAGAAAGAGTCCACACTGCACTTGGT 2066 >seq97981 Length=9611 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || | || ||||| || || || || ||||| ||||| ||||| ||| Sbjct 2695 ATGCAGATCTTTGCAAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 2636 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| || | ||| ||||| ||||| || || | || | || || Sbjct 2635 GACACCATTGAGATTGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCTTCTGACCAG 2576 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | | ||||| |||||||| |||||||| || ||| | || |||||| Sbjct 2575 CAGCGTCTGGTTTTTGCAGGCAAACAGCTGGAAGATGATTATACTCTTTCAGACTACAAC 2516 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 2515 ATTCAGAAAGAGTCCAC 2499 >seq94837 Length=4094 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||||||||| || |||||||| || || || || || Sbjct 3901 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 3960 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| || || | || || || Sbjct 3961 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 4020 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| | || ||||| ||||| || || || || | |||||| | |||| ||| Sbjct 4021 CAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACCCTGAGCGACTAC 4080 Query 23788 AACATACAAAAAGA 23801 ||||| || || || Sbjct 4081 AACATCCAGAAGGA 4094 >seq104553 Length=43841 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| | |||||| | || || || ||| ||||||| | ||| || || Sbjct 35693 ATGCAGATTTTCGTGACAACCCTTATAGGGAAGACCATCGCTCTCGAGGCTGAACCCTCG 35634 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| | || | | || || || ||||| | || || ||||| Sbjct 35633 GATACAATAGAAAATGTGAAGCCCGAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 35574 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || ||||| ||||| ||||||||||| | || ||||| || |||||| Sbjct 35573 CAAAAACTGATCTTTGCTGGCAAGCAACTGGAAGATGGGCGTACTTTGTCTGACTACAAC 35514 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || ||||| ||||| || | ||| | || || || Sbjct 35513 ATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 35479 >seq548 Length=19863 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || || || ||||| || || || || ||| Sbjct 10756 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 10815 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| | ||||| || || | || || || || Sbjct 10816 GACACCATTGAGAATGTCAAAGCTAAAA-TCCAAGACAAGGAGGGCATCCCACCTGACCA 10874 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||| |||||||| ||||| || | ||||| | || ||||| Sbjct 10875 GCAGTGACTGATGTTTGTGGGCAAACAGCTGGAGGATGGCTGCACTCTCTCGGACTACAA 10934 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 10935 CATTCAGAAAGAGTCCAC 10952 >seq99161 Length=19027 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||| | |||||||| | || || || |||| |||| | | ||| ||| Sbjct 11434 AAAATGCAGATTTTCATGAAAACCCTTATGGAGAAGACCATCATTCTCAAGGCTGAGTCC 11493 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 ||| || | |||| |||| || | || || ||||| | || || ||| Sbjct 11494 TTGGATACAATAGAAAATGTAAAGGCCAAGGTCCAGGATAAGGAAGGAATTCCTCCTGAT 11553 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||| |||| | |||| || ||| Sbjct 11554 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAAACGAGTGTGCTTTGTCTGACTAC 11613 Query 23788 AACATACAAAAAGAGTCC 23805 ||||| ||||| | |||| Sbjct 11614 AACATTCAAAAGGTGTCC 11631 >seq67824 Length=12728 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/200 (70%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||||||||| || |||||||| | | | || || |||||||| |||||||| || Sbjct 9650 AAAATGCAGATTTTTGTGAAAACCCTTATGAGGAAGACCATCACTCTTGAAGTTGAACCC 9591 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | | || ||||| |||| || || || || ||||| || || || ||| Sbjct 9590 TGGAATACAAAAAAAATA-TAAAGGCCAAGATCCAGGATAAGGAAGGAGTTCCTCCTGAT 9532 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || | | | |||| ||||| ||||||||||| | | | ||||| || ||| Sbjct 9531 TGGCAAAGACTGACCTTTGAGGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTAC 9472 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| ||||| |||| ||| Sbjct 9471 AACATTCAAAAGGAGTTCAC 9452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337278797999708