Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq18562 255 5e-63
seq145711 165 7e-36
seq95250 87.8 1e-12
>seq18562
Length=18598
Score = 255 bits (282), Expect = 5e-63
Identities = 470/694 (68%), Gaps = 10/694 (1%)
Strand=Plus/Minus
Query 29612 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAG 29671
||||||| ||| || || | || ||||| | ||||||| || || | |||||
Sbjct 12877 GGAAAGG-TCTTGGTTCTCACTGAAGCTGCAGTTTCAGCGGCTCAGTATGATTCAGGTAA 12819
Query 29672 ACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 29731
||||| |||||||||| ||||| ||||| || || || | ||| || ||| ||| ||
Sbjct 12818 ACGTGTGCATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGCG 12759
Query 29732 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCC 29791
||||||| ||||| || |||||||||| |||||| ||||| | || || ||||||||
Sbjct 12758 ATCATGTGGGTGAGCAGGGAGTAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTCT 12699
Query 29792 CCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGT------CG--CTCACGTAAAACT 29843
||||||||||||| |||||||| || ||||| || | || |||||| ||||
Sbjct 12698 GCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCATCACGTAGACACGTAGAACT 12639
Query 29844 GACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCAC 29903
| || | ||||||||| ||||| |||||||||| | | ||||| || ||||| ||||
Sbjct 12638 GGCAAAGGGCATGGCATGGAGGTAGGGCCATGAAAGGAAGATCTTTTGGATTCCAAGCAC 12579
Query 29904 ACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCT 29963
||| ||||| | ||||| || ||| | |||| | ||| | | |||||||| |
Sbjct 12578 ACAGAATGATTCTTCTGTCAGTAGGTTTGGTTTTGATCATGTCAATCACCTTTTGCAGTT 12519
Query 29964 GATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCC 30023
| |||| || || || || |||| | |||||||
Sbjct 12518 GGCCCACTCCTTGACCTGAATAATCTGAATCCATATTTTTGTATTCTGCCCCAAAATGCC 12459
Query 30024 TCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT 30083
||||||| || || || || || || | || ||||||| ||| ||| ||
Sbjct 12458 TCCACTGAAAGCC-TAAACTGGGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCCAAGGC 12400
Query 30084 TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCT 30143
|||| ||||| | || || ||||| |||||||| || || ||| | || || |
Sbjct 12399 CATCCAGGAAGTCACGAGACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGACAGTT 12340
Query 30144 CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAA 30203
|||| | |||||||| || ||| ||||||||||||||||||| | ||||||| |
Sbjct 12339 CTTTAGCATTTGTGGATCCGTTGATAAACCACAGCAGCTCCTCCAAAATCCCCTTCCAGA 12280
Query 30204 AGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTTGAGGCCGTACCTCGCCTGAGACC 30263
| || | ||||| || || || ||||| | | | |||| ||| |||||| | |
Sbjct 12279 ACACACATTTGGTTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCTCGCCCGCACGC 12220
Query 30264 CAAACATGGACAAGACTCCCGTGCCTGTCCTGTC 30297
|||| |||| | || |||||||| | |||
Sbjct 12219 TGAACACCGACAGGGTGCCGGTGCCTGTGCGGTC 12186
>seq145711
Length=17273
Score = 165 bits (182), Expect = 7e-36
Identities = 135/164 (82%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772
||| || |||| ||| || |||||||| ||||| || ||||||||||||||||| |||||
Sbjct 11194 TAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGG 11253
Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCT 29832
||| || || |||||||| ||||||||||||| |||||||| || ||||| || |
Sbjct 11254 CACGCCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCAC 11313
Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGA 29876
|||||| ||||| || | ||||||||| ||||| ||||||||||
Sbjct 11314 CACGTAGAACTGGCAGAGGGCATGGCAGGGAGGTAGGGCCATGA 11357
>seq95250
Length=14987
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| || || || ||||| |||| || | |||||| | | ||||| |||||| || ||
Sbjct 14027 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTCTCAGGA 14086
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||||||||| ||||| ||||||| ||||||| ||||| ||||||
Sbjct 14087 ATGGAGAACCAGGTCTTCTTACCCATAATCACCAAATTCTGTTTACCT 14134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405285044826286
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |