Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq6383 260 1e-64 seq39192 168 6e-37 seq41434 147 2e-30 seq176006 100 2e-16 seq176809 98.7 8e-16 seq121209 98.7 8e-16 seq93240 98.7 8e-16 seq32390 86.0 5e-12 >seq6383 Length=23588 Score = 260 bits (288), Expect = 1e-64 Identities = 583/869 (67%), Gaps = 16/869 (2%) Strand=Plus/Plus Query 4271 TACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAA 4330 |||| ||| || ||||| || || || ||||||| || || || ||||| || ||||| Sbjct 7263 TACTTTCTTCTCAAAGAAGTTGGTCTTCCCTTCTAGTGAGATGTTCTCCATGAAGTCAAA 7322 Query 4331 CGGATTAGTTGCGTT-GTAATGTTTTTC--ACACTTTAGAGCTACA--AGCAATCGGTCA 4385 ||| || || | | | || | || | | || |||| || || | | ||| Sbjct 7323 CGGGTT--TTCCACTCGGAAAGCCTTGCTAAAACCC---AGCTCCAGCAGGAGCCTGTCG 7377 Query 4386 GCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGT 4445 || |||||||| || ||||| |||| | || || || ||||| | |||| || Sbjct 7378 GCCACAAATTCAATGTACTGTTTCATCAAAGTACAATTCATCCCAATGAGCTTCACTGGC 7437 Query 4446 AGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATT 4505 | || | || | ||||| |||||||| | | || | |||| || || |||| | Sbjct 7438 AAGGCCTCCGTGAGGAACTCCTGTTCTATCTTAAATGCATTGATGATGATTTCCTTTACT 7497 Query 4506 TTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGC 4565 || | | || ||||| | | | | || | |||| | || ||||| ||||| ||| Sbjct 7498 TTCTGCTCCGAAGGTTTGTGTGCCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGC 7557 Query 4566 AAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTC 4625 || || || ||||||||||| || ||| | || || || | |||||||| | |||| | Sbjct 7558 AAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGAGGCCGGGCATCAGCCCTCGC 7617 Query 4626 TTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCA 4685 || || ||||| ||||| | | || |||||||| ||||| || ||||| || | ||| Sbjct 7618 TTCTTGAGCCAGAATATCGATGTGAAAGACCCAGAGAAGAAGATTCCTTCCACCTCAGCA 7677 Query 4686 AACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAG 4745 ||||| || | || || | | | ||||||| |||||| || |||||| Sbjct 7678 AACGCCACCACGCGCTCTCCATAGGTGGCCTCTTTGTCCCCAATCCAACGCAAGGCCCAG 7737 Query 4746 TTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAATTTACTTTTT 4802 | || || ||||| || || || || | | || || || || || | || | | Sbjct 7738 TCTGCCTTCTTCTTGACACAAGGCATCTTCTCGATGGCATTGAAGAGGAACTCCCTCTCT 7797 Query 4803 TCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTT 4862 | ||||||| || |||||||| || || ||||| ||||| ||||||||||| ||| Sbjct 7798 T---TGGGGTCTTTGATGTAAGTGTCGATGAGGAGGCTGTACATCTCAGAATGTATGTTT 7854 Query 4863 TCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAA 4922 || || || ||||| || || || ||||| | |||||||| | |||||||| | | Sbjct 7855 TCCATGGCGATCTGGAAGCCATAGAAGCAGCGGGCTTCTGTGATCTGAACTTCCTGGCTG 7914 Query 4923 AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACA 4982 || | || || |||||||| || || || || || ||||||||||| ||||||| || Sbjct 7915 AACCGCTCCACCAAGTTTTCATTCACGATGCCATCGCTGGCTGCAAAGAACGCCAGGACG 7974 Query 4983 TGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTT 5042 || || || |||||| ||||| ||| || | | |||||| ||| || || | Sbjct 7975 TGCGAAATGAAGTACCTCTCGTCGTCCTTCAGGGTCTCCCAGTGCAGCAGGTCCTTGGAA 8034 Query 5043 AAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATA 5102 | || || || || | ||||| || || || || || || |||||||| ||| || Sbjct 8035 AGGTCCACCTCCTCCGCTGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGATG 8094 Query 5103 TCAGGATACTGAATCGGAAGTATGACAAA 5131 || | |||| || || | |||||||| Sbjct 8095 TCGTGGTACTCGATGGGGAAGATGACAAA 8123 >seq39192 Length=20454 Score = 168 bits (186), Expect = 6e-37 Identities = 357/528 (68%), Gaps = 11/528 (2%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||| ||||| ||||| ||| | |||||| |||| || || || || || || | Sbjct 14296 CAGGCAAAGTCACAGTGCAACCCT-CATCTCTGTTAATAAGCTCATTGGAGAATGTGAGG 14238 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || ||||| | |||| ||| || |||| ||||| | | |||||||||||||| Sbjct 14237 CCAGGCATCAGCCCTCGCTTCTTGAGCCCGAATATCAATGTGGAAGACCCAGAAAAGAAG 14178 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA 4727 || ||||| | ||| ||||| | || | || || | | | ||||||| | Sbjct 14177 ATTCCTTCCATGGCAGCAAAGGTCACCACACGATCTCCATAGGGGGCCTCTTTGTCCCCA 14118 Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787 ||||| || || |||| || | ||||| || || || || | | || |||| Sbjct 14117 ATCCAACGCAAGGCTCAGT---CTGTCTTCTTGACACAAGGCATCATTTCAATGACGTTG 14061 Query 4788 AATA---ATTTACTTTTTTCAAATGGGTC-TTGAATATAAGTGTCTATTAGTAGGCTATA 4843 || | | | || || | ||||| |||||| ||||||||||| || | |||||| Sbjct 14060 AAGAGGCACTCCCTCTTCTTG---GGGTCCTTGAATGTAAGTGTCTATGAGGAAGCTATA 14004 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 || ||||||||||| ||||| || |||| ||| || ||||| ||||| | |||| ||| Sbjct 14003 CACCTCAGAATGTATGTTTTCCATGGCAACCTGGAAGCCGTAGAAGCAGCAGGCTTTTGT 13944 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 | |||||||| | | ||| | || || |||||| | || | || || ||||| | Sbjct 13943 GATCTGAACTTCCTGGCTAAACCGCTCCACCAAGTTTGCATTCATGATGCCATCACTCAC 13884 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 |||||| ||||||| || || || || |||||| | ||| |||| | | | ||| Sbjct 13883 TGCAAAGAACGCCAGGACGTGGGAAATGAAGTACCTCTTGTCGTGCTTCATGGTCTCCCA 13824 Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGA 5071 ||| ||| | || | | || || || ||| | |||||||| || Sbjct 13823 GTGCAGCAGGTTCTTGGAAAGGTCTACCTCCTCAGCTGTCCAAAAGGA 13776 >seq41434 Length=11022 Score = 147 bits (162), Expect = 2e-30 Identities = 409/625 (65%), Gaps = 8/625 (1%) Strand=Plus/Minus Query 4382 GTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCAC 4441 |||||| | |||| || ||||| |||| | ||| || || ||||| | |||| Sbjct 7758 GTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATTCATGCCAATGAGCTTCAC 7699 Query 4442 AGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTT 4501 || | || | || | ||||| | |||||| | || || | | ||||| || || Sbjct 7698 TGGCAAGGCCTCGGTGAGGAACTCCTCTTCTATCCTAACCGCATTAATAATTATTTCATT 7639 Query 4502 TATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACA 4561 || | | | | || ||||| | | | || | |||| | || ||||| || || Sbjct 7638 TACTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAACATCAGGCAGGCAAAGTCCCA 7579 Query 4562 ATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621 || | || || ||||||||||| || ||| | || || || | || ||||| | || Sbjct 7578 GTGATAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGAGACCAGGCATCAGCCC 7519 Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681 || ||| | ||||| ||||| | | || |||||||||||||| | |||| || | Sbjct 7518 TCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGAAAAGAAGGTTCCTTGCACCTC 7459 Query 4682 GGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGC 4741 ||||| || || | | || | | | | ||||||| ||||| || || Sbjct 7458 AGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTTGTCCCCGATCCAGCGCAAGGC 7399 Query 4742 CCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTACT 4798 ||||| | || ||||| || || || || | | || || || | | | || Sbjct 7398 CCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAAGGCATTGAAGAGGAACTCCCT 7339 Query 4799 TTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTA 4857 || | || | |||| |||||||||| | || ||||| ||||| |||||||||| Sbjct 7338 TTCCT----TGTGATCTTTGATATAAGTGTTGAGGAGGAGGCTGTACATCTCAGAATGTA 7283 Query 4858 TATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGT 4917 ||||||| || |||||||| || ||||| ||||| | |||||||| | ||||||| | Sbjct 7282 TATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTTCTGTGATCTGAACTTGCT 7223 Query 4918 TACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCA 4977 | | | || || |||||||| || || || || | ||| ||| |||| || ||| Sbjct 7222 GGCTATACTGCTCCACCAAGTTTTCATTCACAATGCCATTACTTGCTACAAAGAATCCCA 7163 Query 4978 AAACATGAGATATAAAGTACTGTTC 5002 || ||||| || |||| || ||| Sbjct 7162 GGACGTGAGAAATGAAGTGCTTTTC 7138 >seq176006 Length=9740 Score = 100 bits (110), Expect = 2e-16 Identities = 125/171 (73%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 31765 AGCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGC 31824 |||||| || || ||| | ||||| ||| || | ||| | || ||||| ||| || |||| Sbjct 6013 AGCGCTTGTGAATACCAACATTCAGATTGCTCTGCCTGCTGGTTGCTATGGAAGAGTAGC 5954 Query 31825 TCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTC 31884 ||| ||||| |||| | |||||||| || || || || || ||||| ||||| Sbjct 5953 TCCACATTCTGGCTTGGGGGCAAAACACTTCATAGATGTAGGAGCTGGTGTCATAGACGA 5894 Query 31885 AGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAA 31932 ||| |||| | |||| |||| |||| ||||||||||||| |||||| Sbjct 5893 AGATTATAAAAGAAATATTGGTGTTGTACTGTTTAATTTTGGCAAAGAAAA 5843 >seq176809 Length=13038 Score = 98.7 bits (108), Expect = 8e-16 Identities = 100/130 (77%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 |||||||| || || ||||| ||||| || || ||||||||||||||||| || || | Sbjct 4232 AAAATCTT---ACCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 4288 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 |||||| ||||| |||| || || || ||||| || |||||||| || | || || | Sbjct 4289 TATGAGAAATAAAATACTTCTCATCTGGTTTAAGCTTGTTCCAGTGAGGGAGGTCCTTTG 4348 Query 5041 TTAAATCAAC 5050 ||| ||||| Sbjct 4349 ATAAGTCAAC 4358 >seq121209 Length=2218 Score = 98.7 bits (108), Expect = 8e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||||||||| || ||||| || || || | |||||||| | |||| |||||| Sbjct 1713 TCATCTCTGCTAATAAGCTCGTTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTTTTG 1772 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| ||||| | || || |||||||| ||||| || ||||| || || |||||||| Sbjct 1773 AGCCAGAATATCGATGCGAAAGACCCAGAGAAGAAGATTCCTTCCACCGCAGCAAACGCC 1832 Query 4692 AC 4693 || Sbjct 1833 AC 1834 >seq93240 Length=4643 Score = 98.7 bits (108), Expect = 8e-16 Identities = 125/171 (73%), Gaps = 6/171 (4%) Strand=Plus/Minus Query 31765 AGCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGC 31824 ||| || || |||||||| ||||| | || | ||| | |||||||| ||| || |||| Sbjct 2413 AGCCCTTGTGAAAACCGACATTCAGGTCACTCTGCCTGCTGGGTGCTATGGAAGATTAGC 2354 Query 31825 TCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTC 31884 ||| | ||||| ||||| | |||| ||| || | | | | || ||||| ||||| Sbjct 2353 TCCACGTTCTGGCTTGGCTGGAAAACCCTTCATAGGCATAAGAGCTGGTGTCATAGA--- 2297 Query 31885 AGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAA 31932 ||| ||||||||||| |||| ||| ||||||||||||| |||||| Sbjct 2296 AGATTATAGAGGAAATATTGGTGCTGTACTGTTTAATTTTGGCAAAGAAAA 2246 >seq32390 Length=18494 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || || || || ||||| || || |||||||| ||||| |||||||| ||||| |||||| Sbjct 8431 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 8372 Query 4320 ATAAAATCAAACGGATT 4336 ||||||||||| ||||| Sbjct 8371 ATAAAATCAAAGGGATT 8355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426126286869533