Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq140902 129 2e-25 seq174306 82.4 2e-11 >seq140902 Length=9069 Score = 129 bits (142), Expect = 2e-25 Identities = 159/217 (73%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 33994 CGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGT---CCGGGTGATAG 34050 |||||||| ||||||| | || |||| ||| || | | | || || || ||| Sbjct 6877 CGGTGCTTGCCGATGATGATTTCGGCCAGGCCCTTGTCCGGTGAGTTTTCCTTGTTGTAG 6936 Query 34051 ACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCG 34110 ||||| ||||| | ||||| ||||| ||| |||||||||||||| || || || ||| Sbjct 6937 TAGTCGTCGCGGTAGATGAACACGATCATGTCCGCGTCCTGCTCGATGGCGCCCGATTCG 6996 Query 34111 CGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGC 34170 |||||||| | ||||| ||| ||||||| | ||| ||||| |||||||||||||| Sbjct 6997 CGCAGGTCAGCCATCACCGGGCGCTTGTCGGTACGCGTTTCCAGCGAGCGGTTGAGCTGG 7056 Query 34171 GACAGCACGATCACGGGGATACCAAGCTCCATGGCCA 34207 || || ||||||| || | |||||| |||||| Sbjct 7057 GAAAGTGCGATCACCGGCACGTTCAGCTCCTTGGCCA 7093 >seq174306 Length=6800 Score = 82.4 bits (90), Expect = 2e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 42757 ATGCTGATCCTGACCAGAAGACCCGGCGAAACCCTGCATATCGGCGACAACATCACCGTC 42816 ||| |||||||||| | | |||||||||| || ||||| ||| | | |||| Sbjct 4547 ATGTTGATCCTGACTCGCCGCGTCGGCGAAACCTTGATGATCGGTGACTCGGTGAGCGTC 4488 Query 42817 ACGGTCCTTGGCAGCCAGGGCGACCAGGTGCGCCTCGGCATCACCGCCCCGGACGACGTC 42876 || || || ||| | |||| ||||||| || |||||||||| || ||| | |||||| Sbjct 4487 ACCGTGCTCGGCGTCAAGGGTAACCAGGTACGTATCGGCATCACTGCGCCGAAGGACGTC 4428 Query 42877 GCCATCCACCGCTCCGAGATCTACCAGC 42904 || | || ||| ||||||||||||| Sbjct 4427 GCTGTGCATCGCGAAGAGATCTACCAGC 4400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160125960620490