Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq161904 187 4e-42 seq175492 86.0 1e-11 >seq161904 Length=2185 Score = 187 bits (206), Expect = 4e-42 Identities = 163/203 (80%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 202540 GAAAAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTT 202599 || |||| ||||| ||||| |||||||| ||| | ||||||| |||||||| || Sbjct 830 GAGAAGAGCGACCGCACCGGTACCGGCACCCGCAGCGTGTTCGGCTGGCAGATGCGCTTC 889 Query 202600 GACCTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATT 202659 ||||| | |||||| ||||| ||||| ||||| || || | ||||| ||||| ||||| Sbjct 890 GACCTCAACGAAGGTTTCCCGCTGGTCACCACCAAGAAACTGCACCTGCGTTCGATCATC 949 Query 202660 CACGAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGG 202719 |||||||||||||||||||||||||| || ||||||||| | |||||||| || ||| | Sbjct 950 CACGAGCTGCTGTGGTTCCTGAAAGGCGATACCAACATCGGCTACCTGAAGGACAACCAG 1009 Query 202720 GTCACTATCTGGGACGAATGGGC 202742 || ||||||||||||||||| Sbjct 1010 GTACGGATCTGGGACGAATGGGC 1032 Score = 102 bits (112), Expect = 1e-16 Identities = 127/172 (74%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 203296 TGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATCGCCTCG 203355 || |||||||| |||||||||| ||| ||||| | ||||||||||| ||||||||| Sbjct 1262 TGCCAGTTGTACCAGCGCAGCGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGC 1321 Query 203356 TATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAGTTCGTC 203415 ||||| | ||||| | |||||||| ||| | | | ||| | || || |||| Sbjct 1322 TATGCGCTGCTGACCCATATGGTTGCGCAGGCGACCGGCCTGGGCGTCGGCGATTTCG-- 1379 Query 203416 TGGACAGGC--GGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCG 203465 || ||| || || || | || |||||||| |||||| | ||||||||||| Sbjct 1380 TGCACACGCTGGGCGACGCGCACCTGTATTCGAACCATTTCGAGCAGGCCCG 1431 >seq175492 Length=8525 Score = 86.0 bits (94), Expect = 1e-11 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 2256 GGCGGGTTACTCAAGCGGC-AACGAGAGCAGACTGTAAATCTGTTGACTTCGGTCTTCGG 2314 || ||| ||| |||||||| |||| | |||||||||||||||| || ||| | |||||| Sbjct 8148 GGAGGGATACCCAAGCGGCCAACGGGGGCAGACTGTAAATCTGCTGGCTTACGCCTTCGG 8207 Query 2315 TGGTTCGAGTCCACCACACGCCACCAG 2341 |||||||| |||||| | | ||||||| Sbjct 8208 TGGTTCGAATCCACCTCCCTCCACCAG 8234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786571890546000