Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq161904 241 8e-59 >seq161904 Length=2185 Score = 241 bits (266), Expect = 8e-59 Identities = 518/755 (69%), Gaps = 31/755 (4%) Strand=Plus/Plus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || |||||||| |||||||| | ||| ||||||| ||| |||| | |||||||| | Sbjct 839 GACCGCACCGGTACCGGCACCCGCAGCGTGTTCGGCTGGCAGATGCGCTTCGACCTCAAC 898 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTT 955 || || ||||||||||||||||| ||| | ||| | ||| | |||| || Sbjct 899 GAAGGTTTCCCGCTGGTCACCACCAAGAAACTGCACCTGCGTTCGATCATCCACGAGCTG 958 Query 956 CTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCG--CTCAACGACAACGGCGTCACCA 1013 ||||||||||| | ||||| || ||| | ||| || || |||||| || | Sbjct 959 CTGTGGTTCCTGAAAGGCGATACCAACATC--GGCTACCTGAAGGACAACCAGGTACGGA 1016 Query 1014 TCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGC 1073 |||||||||| |||||||||| | ||| | || || || || |||||| |||||||| Sbjct 1017 TCTGGGACGAATGGGCCGACGGCAACGGTGATCTTGGCCCGGTGTACGGCAAGCAGTGGC 1076 Query 1074 GGCACTGGCATGTCGAGGACGGAGGATCGTCGTG-GATTGACCAGATCTCGGCCGCCG-T 1131 | |||| || || ||||| |||| ||| |||||||| | | || | | Sbjct 1077 GCAGCTGGGCTGCCGCCGACGGC-------CGTGAGATCGACCAGATG-CAGTGGCTGGT 1128 Query 1132 GGAGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGG 1191 ||| | | | |||| || ||||| ||| ||||| ||| |||||||| || Sbjct 1129 GGACGAGATCAGGCGCAACCCCGATTCGCGGCGGCTGGTGGTCAGCGCCTGGAACGTGGG 1188 Query 1192 TGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGA 1251 || ||| | ||||| || || ||||||| | |||||||| | ||||| | ||| Sbjct 1189 CGAGCTCTCGCAGATGGCGCTGATGCCCTGCCACAACCTGTTCCAGTTCTACGTGGCCGA 1248 Query 1252 CGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGT 1310 ||| ||||| | ||| || | ||||||||||||| ||||| |||||||| ||||||| Sbjct 1249 TGGCAGGCTCA-GTTGCCAGTTGTACCAGCGCAGCGGCGACATCTTCCTCGGCGTGCCGT 1307 Query 1311 TCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGG 1370 |||| |||||| || ||||| || | || ||| | |||||| | |||||||| | | Sbjct 1308 TCAACATCGCCAGCTATGCGCTGCTGACCCATATGGTTGCGCAGGCGACCGGCCTGGGCG 1367 Query 1371 TGGGTGAGCTGATCTGGACCGGC--GGCGACTGCCACATCTACAACAACCACGTCGACCA 1428 | || || | || || || |||||| ||| | || ||||| |||| || Sbjct 1368 TCGGCGA--TTTCGTGCACACGCTGGGCGACGCGCACCTGTATTCGAACCATTTCGAGCA 1425 Query 1429 GGCGCTGATGCAGCTC-CGCCGACGACCGCG-GCCCTACCCGAGGCTCGTGCTACACCAC 1486 ||| | ||||||| ||| || ||||| || || |||| ||| ||| | | | | Sbjct 1426 GGCCCGCGAGCAGCTCTCGCGCTCG-CCGCGAGCGCT-GCCGAAGCT-GTGGTTGAACCC 1482 Query 1487 GCGCCGT---CGATC--TTCGACTACCGGTACGAGCACATCCACCTCGTGAACTACGACC 1541 | | || ||||| |||| || || || ||| |||||| | ||| ||||| | Sbjct 1483 G-GAGGTGACCGATCTGTTCGGCTTCCAGTTCGACGACATCCGCATCGACGGATACGATC 1541 Query 1542 CGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGA 1576 | || ||| ||||||||||||||||||| || ||| Sbjct 1542 CACATCCGGCGATCAAGGCGCCGGTGGCGGTGTGA 1576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295490942228301