Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq134661 150 6e-32 >seq134661 Length=10369 Score = 150 bits (166), Expect = 6e-32 Identities = 176/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 40166 GAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGAT 40225 ||| |||||||| | ||||||||| |||||||| || || |||||||| |||||||| | Sbjct 3466 GAAATCGATGTCGAAGTCGGGCATCGACACGCGTTCCGGATTCAGGAAGCGCTCGAACAG 3407 Query 40226 GAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAGGCGACCAGCGAACC 40285 || || || | || |||||||| ||||| || | || ||||||||||| Sbjct 3406 CAGGTTGTAGGGCAGCGGATCCAGGTCGGTGATCTTCAGCGCCCACGCCACCAGCGAACC 3347 Query 40286 GGCAGCCGAGCCACGTCCGGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAA 40345 |||| | || ||||| || || |||| | | ||| | | |||| |||| |||||| Sbjct 3346 GGCACCAGAACCACGGCCCGGGCCGATCGGGATGCCCTGGTTCTTGCCCCACTGGATGAA 3287 Query 40346 GTCGGCGACGACCAGGAAGTAGGACGGGAACCCCAGCTGGATGATCATGTCGATCTCG 40403 |||||| |||| |||||||||| ||||| |||| || |||||| |||||| |||| Sbjct 3286 GTCGGCCACGATCAGGAAGTAGCCGGGGAAACCCATCTTGATGATGGTGTCGAGCTCG 3229 Score = 116 bits (128), Expect = 1e-21 Identities = 252/376 (67%), Gaps = 6/376 (2%) Strand=Plus/Minus Query 38959 CCTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCG 39018 ||||| ||||| | | ||| ||||| ||| ||| |||| | ||| ||||| Sbjct 4682 CCTCGTCGAGGAAGCCGACCACCTTGTCGGTGTTGTCCATGTCCGAAGACAGCGTGGCCG 4623 Query 39019 CCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGACCGT 39078 ||||| ||||||||||||| || ||| || |||| || |||| || || ||| Sbjct 4622 CCATGAACTCGGCCGGGTAATGGCGCTTGAGCCACGCGGTCTGGTAACTGACCAGCGCGT 4563 Query 39079 ACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACA 39138 | || || | ||||| |||||||||| |||| |||||||| | | || ||| | | Sbjct 4562 AGGCAGCGGCGTGCGACTTGTTGAAGCCGTAGCCGGCGAACTTCTCCATCAGGTCGAAGA 4503 Query 39139 CCGCCTGG---ATGGCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCA 39195 | | | | ||| ||||| | ||| | || | ||| |||| ||||| || Sbjct 4502 TCTCGTCGGCCTTGGGGCCGTC---GACGCCGCCCTTGGCCGCACCCTCGCGGAAGATCT 4446 Query 39196 CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGG 39255 || | |||||||| | | ||| |||||||||||| || || || || ||||||| Sbjct 4445 CGCGGTGCTTGGCCATTTCGGCCGGCACCTTCTTGCCCATCGCACGACGCAGCAGGTCGG 4386 Query 39256 CCTGACCCAGGCTGTACCCAGCGAGGATCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGA 39315 | ||||| ||| || ||| |||||| ||| || | ||||||||||||||| | Sbjct 4385 CGCCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCATCACCTGCTCCTGGTACA 4326 Query 39316 TGACCAGCCCGTAGGT 39331 | | |||||||| Sbjct 4325 CCATGATGCCGTAGGT 4310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159803441485528