Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq161904 203 5e-47 >seq161904 Length=2185 Score = 203 bits (224), Expect = 5e-47 Identities = 196/249 (79%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 196062 GAGAA-AGCTGACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTT 196120 ||||| ||| ||||| ||||| || |||||| | | ||||| | |||||||| || Sbjct 830 GAGAAGAGC-GACCGCACCGGTACCGGCACCCGCAGCGTGTTCGGCTGGCAGATGCGCTT 888 Query 196121 TGACCTGCGCAAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCAT 196180 ||||| | |||| |||||||||||||||||||| || |||||||||| || ||||| Sbjct 889 CGACCTCAACGAAGGTTTCCCGCTGGTCACCACCAAGAAACTGCACCTGCGTTCGATCAT 948 Query 196181 CCACGAACTGTTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAA 196240 |||||| ||| ||||||||||||| ||||| ||||||||| || ||||| |||||| | Sbjct 949 CCACGAGCTGCTGTGGTTCCTGAAAGGCGATACCAACATCGGCTACCTGAAGGACAACCA 1008 Query 196241 CGTCAGTATCTGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAA 196300 || | |||||||| || ||||| || | | || ||||||||||| || ||||| || Sbjct 1009 GGTACGGATCTGGGACGAATGGGCCGACGGCAACGGTGATCTTGGCCCGGTGTACGGCAA 1068 Query 196301 GCAGTGGCG 196309 ||||||||| Sbjct 1069 GCAGTGGCG 1077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768599034155160