Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq140902 132 3e-26 seq124024 84.2 1e-11 >seq140902 Length=9069 Score = 132 bits (146), Expect = 3e-26 Identities = 230/330 (70%), Gaps = 7/330 (2%) Strand=Plus/Plus Query 96755 GGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTT---CATTTCGCTATCC 96811 |||||| || ||||| ||||| || | ||||| | |||||| | | | | ||| Sbjct 6868 GGGCCACCACGGTGCTTGCCGATGATGATTTCGGCCAGGCCCTTGTCCGGTGAGTTTTCC 6927 Query 96812 GGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCT 96871 || || |||||||| || | |||| ||||| ||| ||||||||||| || || Sbjct 6928 TTGTTGTAGTAGTCGTCGCGGTAGATGAACACGATCATGTCCGCGTCCTGCTCGATGGCG 6987 Query 96872 CCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGA 96931 || ||||| || | || | | ||||| || ||||| | |||| ||| ||||| || Sbjct 6988 CCCGATTCGCGCAGGTCAGCCATCACCGGGCGCTTGTCGGTACGCGTTTCCAGCGAGCGG 7047 Query 96932 TTAAGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAG 96991 || || || || | ||| | |||||| || | | ||||| ||||| ||||||| || Sbjct 7048 TTGAGCTGGGAAAGTGCGATCACCGGCACGTTCAGCTCCTTGGCCAAGCCCTTCAGCGAA 7107 Query 96992 CGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCT-CCGGG-ACGCGCATAA 97049 || || ||||| | ||||| || |||| ||| || | | ||||| |||| ||| | Sbjct 7108 CGCGAGATCTCCGAGATTTCTGTCGCGCGGT--TCTCGCTGTTGCCGGGCACGCTCATCA 7165 Query 97050 GTTGCAGGTAGTCGATCATAATCATGCTCA 97079 | |||||||| ||||||| |||| || || Sbjct 7166 GCTGCAGGTAATCGATCACGATCAGGCCCA 7195 >seq124024 Length=2559 Score = 84.2 bits (92), Expect = 1e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 99544 TGGTGCCGATTAACGGACTCGAACCGCTGACATCCTGCTTACAAGGCAGGCGCTCTACCA 99603 |||||||| ||| | || |||||| | |||| | ||| ||||||| ||| ||||||||| Sbjct 2234 TGGTGCCGCTTATCCGAATCGAACGGATGACCTACTGTTTACAAGACAGTTGCTCTACCA 2293 Query 99604 ACTGAGCTAAACCGGCATTGGCGA 99627 ||||||||||| |||||| || || Sbjct 2294 ACTGAGCTAAAGCGGCATGGGTGA 2317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330183771215566