Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq145711 84.2 8e-12 >seq145711 Length=17273 Score = 84.2 bits (92), Expect = 8e-12 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 52120 CTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTCGTGCCATTTG 52178 ||||||||||| | || | ||| ||||| || | |||| || |||| || ||||| | Sbjct 11345 CTCCCTGCCATGCCCTCTGCCAGTTCTACGT-GGTGAATGGGGAGCTGTCCTGCCAGCTA 11287 Query 52179 TATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTG 52238 || ||| |||| || |||||| | ||||||| || || ||||| |||||||| ||| || Sbjct 11286 TACCAGAGGTCAGCAGACATGGGCCTGGGCGTGCCCTTCAACATCGCCAGCTACTCCCTG 11227 Query 52239 CTGAC 52243 || || Sbjct 11226 CTCAC 11222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189695536756610