Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq22824 161 1e-34 >seq22824 Length=28232 Score = 161 bits (178), Expect = 1e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315 |||||||||| |||| || |||||| ||||| || ||||| || || || ||||| Sbjct 24671 GTCTGGAACAACCGCTCATCGTCCCATTCCGGATGCTCCTGTTTAAGCACGTCACACACT 24730 Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375 ||||||||||| | |||||||| |||||||||||||| || ||||| ||||||||||| Sbjct 24731 CTGTTGTGTTCTCGCAGCCAGATCGTGGCGTACATCATCAGACCAGGCACCAGGCCAAAT 24790 Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435 ||| || || ||||| | |||| || ||||| || | || || |||| ||| | Sbjct 24791 AGCTCCTGCCCCACAGCAAACCGCAGGTGCTCGGGGACGTGAGGCGGGTAGAGCATCTCG 24850 Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCT 9484 |||| ||||||||||| ||| || |||| || || ||||| |||| Sbjct 24851 GCCTGAGTGTCTTTGACCGTGGGAGGGTACACCTCGCCATCAATTATCT 24899 Score = 138 bits (152), Expect = 2e-27 Identities = 201/284 (71%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 || || || || ||||| | || | ||||||||||| | || | | || ||| Sbjct 23075 GGGCAGCCTTTCACGTTATTGCATATGAGAGACTGAATTGAGGCAGTGTGGATGATTTTA 23134 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || || || ||||| || |||||||| ||||||||||| || || || || || Sbjct 23135 AAACCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTGAGGAGAACATATAGGATTG 23194 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 |||| || ||||| | |||||| || || || | || | ||| ||||||| |||||| Sbjct 23195 CCCATCAGCCCTTTCAAGGAGAAAGGCGCTCCAAGTTCTACCATGGTCTCACCAAAGATG 23254 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 |||| |||||||||| || |||| | ||| |||||||||||| || || | |||| Sbjct 23255 GCGTCCGGACGGGGCTGCTCTACCAGAAGAGCGGGGTACAGCTCCACGGCATCAATGTCT 23314 Query 8543 CCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 || || || || || || ||||| || ||||| |||||||| Sbjct 23315 CCATAGAGCGCTTCCAGCTCCGCAGCCATTTCCTTCTCTCCTGT 23358 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 ||||||||| || ||||||||||||||||||||||| || ||| ||| ||| | || Sbjct 25755 TCTTACCCCGTGGCCCAGTCCTTTAGTGAAGGCCGGTCCGCGCTTATGATCTGTCTTGAA 25814 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 |||||| || ||||| || ||| | || || |||||||| || || |||||||||||||| Sbjct 25815 AAACTGATGGGTGAAGTGCTGGGCGAAGAATGCAAACATCAAATTTGTGCCCTGGGGATC 25874 Query 9769 GGGA 9772 ||| Sbjct 25875 CGGA 25878 Score = 113 bits (124), Expect = 6e-20 Identities = 185/264 (70%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 8944 CTTACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGAGTC 9003 ||||| | ||| || ||||| || |||| ||||| || | ||||||||| ||||| | Sbjct 24064 CTTACCCTGCCAGCAATTTGCTTGCTGAATGATTCAACAAACTGGGTAATCCCGTGCTCC 24123 Query 9004 ATGAGTATGGAATTGTTGTAGACGAAGTTAACGTAGTCATACTTTGTTTTATCAATCTCA 9063 || | ||| || |||||||||| || | ||||| || | | |||||| | | Sbjct 24124 ATTAATATAGAGTTGTTGTAGAGAAACTGTTGGTAGTTGTAATCCTGGTCATCAATTTGA 24183 Query 9064 AATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACGA 9123 || || |||| ||| | ||||||||| || | | |||||||||| | | || || Sbjct 24184 AAGCTGTCGGGCAGGAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCCGAGATGCGG 24243 Query 9124 TTTTGGTACTGGAAC-GAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAATG 9182 ||||||||||||||| | | ||| ||||| || || | |||| ||| | || || Sbjct 24244 TTTTGGTACTGGAACTGCTGGTTGAAA-AGCAGCTCAGGGTCAAACTTCAGTTTGAAGTG 24302 Query 9183 GTAGCCGCTGAGCTGCTGAACGTA 9206 ||||| || || ||||| ||||| Sbjct 24303 ATAGCCACTCAGATGCTGTACGTA 24326 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| || || | || ||||| || || | | || ||||| |||| || | Sbjct 26362 TCACCTTTCACACCCATGGGGGTTGGGCAGTCATCGGCCACGGGAGGAAGAACTCTGGTA 26421 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 ||||||||||| || || || |||||||||||| ||| | |||| ||||||||| | Sbjct 26422 TAATAGGAGAGGTTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGCGCGTTGTAAGTT 26481 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || ||||| || ||||||| ||||| |||| Sbjct 26482 GGTGGGCTATCGATCAAATGTGATCTGGCTGA 26513 Score = 86.0 bits (94), Expect = 9e-12 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 9483 CTGATACTTCATTTTTCCGTCTTTGAAGAGACGCAGCTTAGTCTGTTTTTCTGGCGTCTC 9542 ||||||||||||||||||||| ||||| || ||||||||| |||| | || || || Sbjct 25019 CTGATACTTCATTTTTCCGTCCTTGAAAAGGCGCAGCTTATGCTGTCTCTCCAAAGTTTC 25078 Query 9543 TCCATAGATGTGGTTGAGATCCACCTAGA--GATACAGA 9579 ||||| ||||| || || |||||||||| ||||||| Sbjct 25079 ACCATAAATGTGATTTAGGTCCACCTAGAAGAATACAGA 25117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715287116735040