Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq22824 161 1e-34
>seq22824
Length=28232
Score = 161 bits (178), Expect = 1e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315
|||||||||| |||| || |||||| ||||| || ||||| || || || |||||
Sbjct 24671 GTCTGGAACAACCGCTCATCGTCCCATTCCGGATGCTCCTGTTTAAGCACGTCACACACT 24730
Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375
||||||||||| | |||||||| |||||||||||||| || ||||| |||||||||||
Sbjct 24731 CTGTTGTGTTCTCGCAGCCAGATCGTGGCGTACATCATCAGACCAGGCACCAGGCCAAAT 24790
Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435
||| || || ||||| | |||| || ||||| || | || || |||| ||| |
Sbjct 24791 AGCTCCTGCCCCACAGCAAACCGCAGGTGCTCGGGGACGTGAGGCGGGTAGAGCATCTCG 24850
Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCT 9484
|||| ||||||||||| ||| || |||| || || ||||| ||||
Sbjct 24851 GCCTGAGTGTCTTTGACCGTGGGAGGGTACACCTCGCCATCAATTATCT 24899
Score = 138 bits (152), Expect = 2e-27
Identities = 201/284 (71%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362
|| || || || ||||| | || | ||||||||||| | || | | || |||
Sbjct 23075 GGGCAGCCTTTCACGTTATTGCATATGAGAGACTGAATTGAGGCAGTGTGGATGATTTTA 23134
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| || || ||||| || |||||||| ||||||||||| || || || || ||
Sbjct 23135 AAACCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTGAGGAGAACATATAGGATTG 23194
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
|||| || ||||| | |||||| || || || | || | ||| ||||||| ||||||
Sbjct 23195 CCCATCAGCCCTTTCAAGGAGAAAGGCGCTCCAAGTTCTACCATGGTCTCACCAAAGATG 23254
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542
|||| |||||||||| || |||| | ||| |||||||||||| || || | ||||
Sbjct 23255 GCGTCCGGACGGGGCTGCTCTACCAGAAGAGCGGGGTACAGCTCCACGGCATCAATGTCT 23314
Query 8543 CCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586
|| || || || || || ||||| || ||||| ||||||||
Sbjct 23315 CCATAGAGCGCTTCCAGCTCCGCAGCCATTTCCTTCTCTCCTGT 23358
Score = 116 bits (128), Expect = 5e-21
Identities = 100/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708
||||||||| || ||||||||||||||||||||||| || ||| ||| ||| | ||
Sbjct 25755 TCTTACCCCGTGGCCCAGTCCTTTAGTGAAGGCCGGTCCGCGCTTATGATCTGTCTTGAA 25814
Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768
|||||| || ||||| || ||| | || || |||||||| || || ||||||||||||||
Sbjct 25815 AAACTGATGGGTGAAGTGCTGGGCGAAGAATGCAAACATCAAATTTGTGCCCTGGGGATC 25874
Query 9769 GGGA 9772
|||
Sbjct 25875 CGGA 25878
Score = 113 bits (124), Expect = 6e-20
Identities = 185/264 (70%), Gaps = 2/264 (1%)
Strand=Plus/Plus
Query 8944 CTTACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGAGTC 9003
||||| | ||| || ||||| || |||| ||||| || | ||||||||| ||||| |
Sbjct 24064 CTTACCCTGCCAGCAATTTGCTTGCTGAATGATTCAACAAACTGGGTAATCCCGTGCTCC 24123
Query 9004 ATGAGTATGGAATTGTTGTAGACGAAGTTAACGTAGTCATACTTTGTTTTATCAATCTCA 9063
|| | ||| || |||||||||| || | ||||| || | | |||||| | |
Sbjct 24124 ATTAATATAGAGTTGTTGTAGAGAAACTGTTGGTAGTTGTAATCCTGGTCATCAATTTGA 24183
Query 9064 AATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACGA 9123
|| || |||| ||| | ||||||||| || | | |||||||||| | | || ||
Sbjct 24184 AAGCTGTCGGGCAGGAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCCGAGATGCGG 24243
Query 9124 TTTTGGTACTGGAAC-GAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAATG 9182
||||||||||||||| | | ||| ||||| || || | |||| ||| | || ||
Sbjct 24244 TTTTGGTACTGGAACTGCTGGTTGAAA-AGCAGCTCAGGGTCAAACTTCAGTTTGAAGTG 24302
Query 9183 GTAGCCGCTGAGCTGCTGAACGTA 9206
||||| || || ||||| |||||
Sbjct 24303 ATAGCCACTCAGATGCTGTACGTA 24326
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||||| || || | || ||||| || || | | || ||||| |||| || |
Sbjct 26362 TCACCTTTCACACCCATGGGGGTTGGGCAGTCATCGGCCACGGGAGGAAGAACTCTGGTA 26421
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
||||||||||| || || || |||||||||||| ||| | |||| ||||||||| |
Sbjct 26422 TAATAGGAGAGGTTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGCGCGTTGTAAGTT 26481
Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059
|| ||||| || ||||||| ||||| ||||
Sbjct 26482 GGTGGGCTATCGATCAAATGTGATCTGGCTGA 26513
Score = 86.0 bits (94), Expect = 9e-12
Identities = 79/99 (80%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 9483 CTGATACTTCATTTTTCCGTCTTTGAAGAGACGCAGCTTAGTCTGTTTTTCTGGCGTCTC 9542
||||||||||||||||||||| ||||| || ||||||||| |||| | || || ||
Sbjct 25019 CTGATACTTCATTTTTCCGTCCTTGAAAAGGCGCAGCTTATGCTGTCTCTCCAAAGTTTC 25078
Query 9543 TCCATAGATGTGGTTGAGATCCACCTAGA--GATACAGA 9579
||||| ||||| || || |||||||||| |||||||
Sbjct 25079 ACCATAAATGTGATTTAGGTCCACCTAGAAGAATACAGA 25117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715287116735040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |