Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq94837 150 4e-31
seq161317 147 5e-30
seq110331 145 2e-29
seq90621 120 7e-22
seq97981 107 5e-18
seq85393 104 6e-17
>seq94837
Length=4094
Score = 150 bits (166), Expect = 4e-31
Identities = 146/188 (78%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || ||||||||||| |||||||| || |||
Sbjct 3907 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 3966
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct 3967 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 4026
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| ||||| || || || |||||||| |||||| | || || ||| || ||| ||
Sbjct 4027 CGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACCCTGAGCGACTACAACATC 4086
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 4087 CAGAAGGA 4094
>seq161317
Length=2104
Score = 147 bits (162), Expect = 5e-30
Identities = 152/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || ||||| || || || ||||| || ||||| || || || |||||||
Sbjct 1750 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGATACCATCG 1691
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| || || || ||||||||||||||| || || |||||||| |||||||| || || |
Sbjct 1690 ACAATGTTAAGTCAAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGCCTGA 1631
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||| || ||||| || ||||||||||| | || |||||||| || ||| | || || |
Sbjct 1630 TCTTTGCTGGAAAGCAACTCGAAGATGGCCGAACCCTTGCCGACTACAACATTCAGAAGG 1571
Query 178111 AATCAACACTGCATCTTGT 178129
|||| || || ||||| ||
Sbjct 1570 AATCTACCCTTCATCTCGT 1552
Score = 131 bits (144), Expect = 4e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || | || || || || |||||||||||||| || || |||
Sbjct 2039 CAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGAC 1980
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| |||||||||||||| || || ||||| || |||||||||
Sbjct 1979 ACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAA 1920
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || |||||||| || ||||| || || || | ||||| | ||||| ||| |
Sbjct 1919 CGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAACATT 1860
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || || ||||||
Sbjct 1859 CAGAAGGAGTCCACTCTTCACCTTGTT 1833
Score = 127 bits (140), Expect = 5e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| ||||| |||||||| ||||| || |||||||| ||||| || | |||
Sbjct 1301 CAGATTTTTGTGAAGACTCTCACCGGAAAGACCATCACCCTTGAGGTCGAGTCCAGTGAC 1242
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || |||||||||||||| || || || || || || || ||
Sbjct 1241 ACTATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAACAG 1182
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || ||| | |||||||| | || | ||| || ||| |
Sbjct 1181 CGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTAAGCGACTACAACATT 1122
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || || ||||| || || || ||| | ||||
Sbjct 1121 CAGAAGGAGTCAACTCTTCACCTCGTTCTCCGACT 1087
>seq110331
Length=4397
Score = 145 bits (160), Expect = 2e-29
Identities = 140/180 (78%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||||||||| || || || || || || |||||||||||||| || ||| ||||||||
Sbjct 1987 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 1928
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| || ||||| ||||| |||||||| || || || || |||||||| || |||||
Sbjct 1927 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGACT 1868
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|||||||| || || |||||||| ||||| | ||||| |||| || ||| |||| ||
Sbjct 1867 GATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAA 1808
>seq90621
Length=40446
Score = 120 bits (132), Expect = 7e-22
Identities = 156/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| ||||||| || ||||| || |||||| ||| |||| ||| |||||||
Sbjct 28895 CAGATTTTTGTGAAAATCCTTACAGGGAA---GATCACACTCAAGGTCGAACCCTCAGAC 28951
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| | || || || || ||||| ||||| ||||||||||| ||||| || |||||
Sbjct 28952 ACAAGAGAAAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGATAAGCAA 29011
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| | || ||| | || | ||| || | ||| | | || | ||| |
Sbjct 29012 AGACTGATCTTTG-CGTAAAGCCACTGGGAGACTGACGTACTTTGTCTGACTGCAACATT 29070
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGAC 178137
|||||| | || || || ||||||||||||||||
Sbjct 29071 CAAAAACAGTCCACTCTCCATCTTGTTTTGAGAC 29104
>seq97981
Length=9611
Score = 107 bits (118), Expect = 5e-18
Identities = 139/190 (73%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--GACACCATCGAGA 177993
|| || || || || || || |||||||||||||| | ||| || |||||||| ||||
Sbjct 2680 AAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGTGACACCATTGAGA 2623
Query 177994 ACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCT 178053
|||||| || || || ||||| || || |||||| | |||||||| || || | |
Sbjct 2622 TTGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCTTCTGACCAGCAGCGTCTGGTTT 2563
Query 178054 TCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAAT 178113
| || || |||||||| ||||||| |||||| | || || ||| | || ||||| |
Sbjct 2562 TTGCAGGCAAACAGCTGGAAGATGATTATACTCTTTCAGACTACAACATTCAGAAAGAGT 2503
Query 178114 CAACACTGCA 178123
| || |||||
Sbjct 2502 CCACCCTGCA 2493
>seq85393
Length=7687
Score = 104 bits (114), Expect = 6e-17
Identities = 149/207 (72%), Gaps = 5/207 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| | || || || || | |||| || ||||| || || |||
Sbjct 5465 CAGATCTTTGTGAAGGCCCTGACTGGCAAGATCATCATGCTTGAGGTTGA--GCCCAGTG 5522
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||||| |||||||||||| || || | ||||| || || ||||| || |||||||
Sbjct 5523 ACACCACTGAGAACGTCAAAGGTAAAATCTAAGACAAGGAGGGCATCCCGCCTGACCAGC 5582
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| ||||| || || || || |||||||| |||||||| | ||||| | || || |||
Sbjct 5583 AGCGACTGATTTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCGGACTAAAACA 5642
Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| || || ||||| ||||
Sbjct 5643 CTCAGAAAGAGTCCACTCTGCA-CTTG 5668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1200995178792794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |