Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20alecto_20[refseq_20GCF_5F000325575.1_202013-12-04] 65,598 sequences; 1,985,975,446 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq10551 120 2e-22 >seq10551 Length=27482606 Score = 120 bits (132), Expect = 2e-22 Identities = 312/468 (67%), Gaps = 6/468 (1%) Strand=Plus/Minus Query 96998 ACTTT-AGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAG-AGCATCAAT 97055 ||||| || ||||||||||||| | ||| | ||||||| | | || ||| ||||| Sbjct 11321967 ACTTTGAGCTTTGGGAAAGGCCTTGTTTTTCACTGAAGCTGCATTTTCAGCAGC-TCAAT 11321909 Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115 |||||||| |||||||| |||||||| ||||||| | ||| || || || | || Sbjct 11321908 GTGATTCAGGTAAATGTGGGCATCTCCCAAAGTGTATACAAAATCACCTGGCCTCAGGTC 11321849 Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 | | || | |||||| | || || | || ||| | |||||||| || |||| | Sbjct 11321848 CATAATTTGTGTGATCATGTAGGTGAACAAGGAGTAGTTGGCAATGTTGAAGAGCACACA 11321789 Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATA 97235 | ||| || || | || || || | ||| || || ||||| |||| |||||| Sbjct 11321788 CACGTCCACGTCCACTAACCTCTGGTACA-CTGGCAAGACAGCTTACCATTTTCCACATA 11321730 Query 97236 AAACTGACTCAATA-CATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCC 97294 | ||| || | ||||| | | | || |||| |||| || | ||||| Sbjct 11321729 GGA-TGAGCAAAGAGCATGATATGCAGATAAGACCATGAGAGGAAGATATTTTGGATTCC 11321671 Query 97295 AAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCT 97354 ||||||||| | |||||||| || ||||| |||| || ||| | |||||| | Sbjct 11321670 AAGCACACAGGATAATTCTTCTGTCATCAGGGTTGGTGTTGATTATATGAGTTATCTTTT 11321611 Query 97355 TTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAA 97414 | | ||| || || ||| | | ||||| || | | ||| |||||||| |||| Sbjct 11321610 TCAGTTGGTCTACTGCTTGACTAGAATAATCTGAATTCATATCTTTGTATTCTGCCCCAA 11321551 Query 97415 AATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTC 97462 |||||||| | || || |||| ||| || || || ||||| |||| Sbjct 11321550 AATGCCTCTACTGAAAGCCATTAACTGGATGAAAATCCCCTTCGTCTC 11321503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346506754644860