Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20alecto_20[refseq_20GCF_5F000325575.1_202013-12-04] 65,598 sequences; 1,985,975,446 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq14102 105 6e-18 >seq14102 Length=4978252 Score = 105 bits (116), Expect = 6e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| || |||||| |||| ||||||||| Sbjct 325767 GGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAATTTTACCTGGAGGAGGTGATG 325826 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || | || || || |||||||| | ||||| ||||| || || |||||| Sbjct 325827 CCCCAGGCTGAGAGCCAGGGCCCAGACATCAAGAAACACGTGAACTCCCTTGGGGAAAAG 325886 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTGC 129026 || || || || | || | || || |||||| Sbjct 325887 CTGAAGACACTCAGGCTGAGGCTTCGGCGCTGC 325919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447383255865760