Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20alecto_20[refseq_20GCF_5F000325575.1_202013-12-04] 65,598 sequences; 1,985,975,446 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq13090 87.8 1e-12 >seq13090 Length=34591212 Score = 87.8 bits (96), Expect = 1e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || ||||| || ||||| || ||||||||||||||| ||||| || || | |||||| Sbjct 25833549 GCGATCATATAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCAAGGCCCATG 25833490 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | | ||||||||||| ||||| || || ||||| | | ||| || ||||| || Sbjct 25833489 T-CTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACATAGAACTGGCA 25833431 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | ||| | ||| ||||| || || || || Sbjct 25833430 AAGGGTATGGCATGGAGGTAGGGCCATGAG 25833401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339865668279654