Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20alecto_20[refseq_20GCF_5F000325575.1_202013-12-04] 65,598 sequences; 1,985,975,446 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq4924 82.4 5e-11 >seq4924 Length=6499587 Score = 82.4 bits (90), Expect = 5e-11 Identities = 165/245 (67%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 21824 ATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAAC 21883 |||| |||||||||||| || | || || | || ||||| ||||| ||| ||||| Sbjct 3091056 ATAGGTCAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGT 3090997 Query 21884 GGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACC 21943 |||| || || || | | || | ||| || || ||||| || || | || Sbjct 3090996 GGAACCCAGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCC 3090937 Query 21944 TGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGC 22003 | |||| ||||| || |||||||| ||||| || || |||||| ||| | | Sbjct 3090936 CCCAGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTC 3090877 Query 22004 CGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATA 22063 |||||||| |||||||| || || || || || |||| ||||| | | || || | Sbjct 3090876 TGATTACAACATTCAGAAAGAGTCGACCCTGCACCTGGTCCTACGTCTGAGGGGCGGCTG 3090817 Query 22064 TTAAT 22068 ||||| Sbjct 3090816 TTAAT 3090812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357838487951692