Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20alecto_20[refseq_20GCF_5F000325575.1_202013-12-04] 65,598 sequences; 1,985,975,446 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq65591 98.7 2e-15 >seq65591 Length=11041708 Score = 98.7 bits (108), Expect = 2e-15 Identities = 170/243 (70%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || ||||||| | ||||| || || | ||| | ||| | ||| || ||| | Sbjct 2177354 TTTCTTAGTACCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCT 2177413 Query 171893 ATAATCTGATAAAGATC-GTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTT 171951 ||||| || || ||| || | || |||| ||| || |||||||| || | ||| || | Sbjct 2177414 GTAATCAGACAA-GATATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATAAGTCTTTGCT 2177472 Query 171952 GGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTG 172011 | | ||| || |||||||| ||||| || || || ||| || ||| ||||||| Sbjct 2177473 GATGAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTGTATCTTCTATTGTATCTG 2177532 Query 172012 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA-TGTTTTAATGAATATCTGCATT 172070 | | ||| || | ||||||||||| || || ||| ||||| | || |||||||| Sbjct 2177533 AGGGTTCAACCTTGAGAGTAATGGTCTTCCCTCATAAGGGTTTTCACAAAAATCTGCATC 2177592 Query 172071 TTA 172073 ||| Sbjct 2177593 TTA 2177595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904393811108400