Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteropus_20alecto_20[refseq_20GCF_5F000325575.1_202013-12-04]
65,598 sequences; 1,985,975,446 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq10551 118 1e-21
seq65591 111 1e-19
seq5812 100 3e-16
seq2541 95.1 1e-14
seq3210 89.7 5e-13
seq65597 87.8 2e-12
seq14121 84.2 2e-11
seq7793 82.4 7e-11
seq5350 82.4 7e-11
>seq10551
Length=27482606
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || ||||| || || || || ||||| || ||| ||
Sbjct 16152180 GATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACTCTCGAGGTTGAACCCTT 16152239
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| | || |||| ||| ||||| |||||
Sbjct 16152240 GGATACAATAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGAAATTCCTCCTGATCA 16152299
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||| |||||| || || || ||||| ||| | | |||| || || ||
Sbjct 16152300 GCAAAGACTGACCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTCTGTCTGACTACAA 16152359
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGC 24917
|||||||||||| || || || || | |||||||
Sbjct 16152360 CATTCAAAAGGAGTCCACGCTTCATCTTGTGTTGC 16152394
>seq65591
Length=11041708
Score = 111 bits (122), Expect = 1e-19
Identities = 163/227 (72%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 24695 ATTGATACGATGCAGATCTTTATTAAAACGCTAACC-GGTAAAACTATTACGCTCGAAGT 24753
|||| || ||||||||| ||| | ||||| || | || || || ||||| ||| | ||
Sbjct 2177600 ATTGCTAAGATGCAGATTTTTGTGAAAACCCTTATGAGGGAAGACCATTACTCTCAAGGT 2177541
Query 24754 AGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACC 24813
||| || | || ||| ||||| ||| |||||||| || || |||||||| ||
Sbjct 2177540 TGAACCCTCAGATACAATAGAAGATACAAAGGCCAAGATCCAGGATAAGGAAGGAATTCC 2177481
Query 24814 TCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAA-CATGT 24872
||| |||| ||| | | |||||||| || || || ||||| ||| || | | | |||
Sbjct 2177480 TCCTCATCAGCAAAGACTTATCTTTGCTGGCAAGCAACTGGAAGATG-GACATATCTTGT 2177422
Query 24873 CAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
| ||||| | |||||||||||| || || || || | |||||| ||
Sbjct 2177421 CTGATTACAGCATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 2177375
>seq5812
Length=6624047
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 3076524 GATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 3076583
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 3076584 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 3076643
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| || |||||||| || | | | |||| || || ||
Sbjct 3076644 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGACGCACCCTGTCCGACTACAA 3076703
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || || || || || || ||| |||| | || ||| | |||||
Sbjct 3076704 CATCCAGAAAGAGTCCACCCTGCACCTGGTCCTTCGCTTGAGGGGAGG 3076751
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || || | |||||||| || || || || || || || ||
Sbjct 3075610 ACAATGCAGATCTTCGTGAAGACTTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCC 3075669
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| |||||| | || | || || |||||||||||||| || || || || || ||
Sbjct 3075670 AGCGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGAC 3075729
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || | ||||||||||||| || |||||||| || | | | | | || || ||
Sbjct 3075730 CAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGGCGCACCCTCTCCGACTAC 3075789
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| || || || || || || ||| ||||
Sbjct 3075790 AACATCCAGAAAGAGTCCACCCTGCACCTGGT 3075821
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 3075840 GATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 3075899
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 3075900 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 3075959
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| || |||||||| || | | | | | || || || ||
Sbjct 3075960 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGGCGCACCCTCTCCGACTACAA 3076019
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || || || || ||| ||||
Sbjct 3076020 CATCCAGAAAGAGTCCACTCTGCACCTGGT 3076049
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 3076068 GATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 3076127
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 3076128 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 3076187
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| || |||||||| || | | | | | || || || ||
Sbjct 3076188 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGGCGCACCCTCTCCGACTACAA 3076247
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || || || || ||| ||||
Sbjct 3076248 CATCCAGAAAGAGTCCACTCTGCACCTGGT 3076277
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || | |||||||| || || || || || || || |||
Sbjct 3076296 GATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 3076355
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 3076356 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 3076415
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| || |||||||| || | | | | | || || || ||
Sbjct 3076416 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGGCGCACCCTCTCCGACTACAA 3076475
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || || || || ||| ||||
Sbjct 3076476 CATCCAGAAAGAGTCCACTCTGCACCTGGT 3076505
>seq2541
Length=1506631
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | ||||| || || || || | | || || || || ||| || |
Sbjct 494347 GATGCAGATTTTTGTGAAAACCCTTACGGGAAAGTCCTTCACTCTTGAGGTTGAACCCTC 494288
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
| ||| |||||| ||||| |||||||| || || ||||||| ||||| |||||
Sbjct 494287 GGTTACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAACTCCTCCTGATCA 494228
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||| |||||| | || || ||||| || | | | |||| || || |
Sbjct 494227 GCAAAGACTGACCTTTGCTGACAAGCAACTGGAAGACGGACGTACCTTGTCTGACTACAG 494168
Query 24883 CATTCAAAAGGAATCGACAC 24902
|||||||||||| || ||||
Sbjct 494167 CATTCAAAAGGAGTCCACAC 494148
>seq3210
Length=13039658
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/211 (72%), Gaps = 6/211 (3%)
Strand=Plus/Minus
Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC-ACC 24763
|||||||||| | || || | |||| || || || || || || || |||||| | |
Sbjct 10166944 TGCAGATCTTCGTGAAGACCTTGACCGAGAAGACCATCACCCTGGAGGT-GAAGCCCAGC 10166886
Query 24764 GACACAGTAGAA-ACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || ||| | | | || ||||||||| ||||| || || || || |||||
Sbjct 10166885 GACACCATTGAGCACGTTGAGGCCAA-GATCCAAGATAAAGAGGGCATCCCCCCTGATCA 10166827
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGA-AACATGTCAGATTATA 24881
| | | ||||||||||| ||||||||||||| || | || | | | |||| || || |
Sbjct 10166826 ATAGAGGCTGATCTTTGCCAGGAAACAGCTGGAAGA-TGGACACATCCTGTCCGACTACA 10166768
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912
|||| || || || || || || || ||||
Sbjct 10166767 ACATCCAGAAAGAGTCTACTCTGTACCTGGT 10166737
>seq65597
Length=65395183
Score = 87.8 bits (96), Expect = 2e-12
Identities = 148/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || | || || || ||||| | | | || || |||
Sbjct 13732942 GATGCAGATCTTCGTGAAGACACTGATGGGCAAGACCATTACACACAAGGTCGAGCCCAG 13732883
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|||| || |||| ||| | ||| |||| |||||| ||||| || || | || |
Sbjct 13732882 TAACACCACTGATAACGTCAAAGCTAAA-ATCCGAGACAAGGAAGGCATCCCACATGACC 13732824
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || || |||| ||||| || |||||||||||||| | | | ||||| || |
Sbjct 13732823 AGCAGTGTCTGATTTTTGCGGGCAAACAGCTGGAGGACAATCGCACTCTCTCAGACTACA 13732764
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||||| || || || || || |||||||||
Sbjct 13732763 ACATTCAGAAAGAGTCCACTCTGCACTTGGTG 13732732
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/214 (71%), Gaps = 9/214 (4%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| |||||||| | ||| || ||||| || || || || ||||| || || |||
Sbjct 48054908 GATGCAAATCTTTATGATAACCCTGACCGGCAAGACCATCACACTCGAGGTCGAGCCCAG 48054849
Query 24763 CGA---CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
|| ||| | |||| || ||| | ||| |||||||| | || || || | || ||
Sbjct 48054848 TGATGCCACTG-AGAAT-GGCAAAGCTAAA-ATCCAAGATGAGGAGGGCATCCTACCTGA 48054792
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
|| | ||| |||| ||||| || |||||||||||||| | | | || | || || ||
Sbjct 48054791 CCAGTAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGA-TGGCCACAC-TCTCCGACTA 48054734
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || || || || || || || |||||||||
Sbjct 48054733 CAATATCCAGAAAGAGTCCAC-CTGCACTTGGTG 48054701
>seq14121
Length=32252759
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/228 (68%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| || || || |||| ||||| || || || || |||||||| | |
Sbjct 18962255 GATGCAGATCTTCATAAAGACCTTAACTGGTAAGACCATCACCCTGGAAGTAGAGCCTAG 18962314
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||| | || | || | | |||| |||| |||| | | || || || || |
Sbjct 18962315 TAACACCATTGAGAATGTCGAGGCCACGATCTAAGATAAAGCATGCATTCCCCCTGACTA 18962374
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||||| ||||||| ||| | ||| | | | |||| | | ||
Sbjct 18962375 GCAGAGGTTGATCTTTGCCAGGAAACACCTGAATGATGGGCACACCTTGTCTAACCA-AA 18962433
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || || ||||| || |||| |||||| || | ||| | |||||
Sbjct 18962434 CATCCAGAAAGAATCCACTCTACTCTTGGTCCTGTGCTTGAGGGGAGG 18962481
>seq7793
Length=19070987
Score = 82.4 bits (90), Expect = 7e-11
Identities = 167/245 (68%), Gaps = 10/245 (4%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAAC----CGGTAAAACTATTACGCTCGAAGTAGAAG 24758
||||||||||||| | || | || || ||| || || || | ||||| || ||
Sbjct 18919638 GATGCAGATCTTTGTGAAGAGCCTGACATTGCGGCAAGACCATCGCACTCGAGGTCGAGC 18919697
Query 24759 CCACCGACAC-AGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCC 24817
||| ||||| | | ||||| ||| | ||| ||||||||||| || || || || ||
Sbjct 18919698 CCAGTGACACCACTGAAAACGTCAAAGCTAAA-ATCCAAGACAAGGAGGGCATCCCACCT 18919756
Query 24818 GATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGAT 24877
|| || || ||| |||| ||||| || ||||||||||| || | | | |||||
Sbjct 18919757 GACCAGCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGACAGCTGCACTCTCTCAGAC 18919816
Query 24878 TATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACT 24937
|| || ||| | || || || || ||||||||| | | ||| || ||| |||
Sbjct 18919817 TAAAA----CAACAAGAGTCCACTCTGCACTTGGTGCTTCTTCTGCAGGGCGGCATCACT 18919872
Query 24938 GAGCC 24942
|||||
Sbjct 18919873 GAGCC 18919877
>seq5350
Length=2239624
Score = 82.4 bits (90), Expect = 7e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||| ||| | ||||| || | | || |||| || ||| | ||| || |
Sbjct 1454293 ATGCAGACTTTTGTGAAAACTCTTAAGGAGAAGACTACCACTCTCAAGACTGAACCCTCG 1454352
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
| ||| ||||| |||| |||||||| || || |||||||| ||||| |||||
Sbjct 1454353 AATACAAAAGAAAATATAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 1454412
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882
||| | || ||||||| || || || ||||| ||| || | || |||| || || ||
Sbjct 1454413 CAAAGGCTGCTCTTTGCTGGCAAGCAACTGGAAGATG-GATATACTCTGTCTGACTACAA 1454471
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
||||||||||| || || || | | |||||| ||
Sbjct 1454472 TATTCAAAAGGAGTCCACTCTTAATCTTGTGTTGAGA 1454508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449528695215440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |