Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20alecto_20[refseq_20GCF_5F000325575.1_202013-12-04] 65,598 sequences; 1,985,975,446 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq5812 149 4e-31 seq4924 111 1e-19 seq4361 98.7 6e-16 seq65597 95.1 8e-15 seq2193 93.3 3e-14 seq7793 84.2 1e-11 seq847 84.2 1e-11 seq12046 82.4 5e-11 >seq5812 Length=6624047 Score = 149 bits (164), Expect = 4e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | ||||||||||| | |||| ||| ||||| ||||| ||||| || Sbjct 3076751 CCTCCCCTCAAGCGAAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 3076692 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| | || ||||| ||||||||||| |||||||| | |||||||| | || Sbjct 3076691 AGGGTGCGTCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 3076632 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || |||||| | || | || ||| ||| || Sbjct 3076631 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACC 3076572 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || | |||||| || ||||||||||| Sbjct 3076571 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 3076525 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||| ||||| ||||| ||||| || ||| ||||| | || Sbjct 3075824 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCT 3075765 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||| |||||||| | |||||||| | || | ||||||||||| Sbjct 3075764 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 3075705 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || ||| ||| || || | ||| |||||| Sbjct 3075704 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 3075645 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||||| || ||||||||||| Sbjct 3075644 TTACCGGTCAAAGTCTTCACGAAGATCTGCAT 3075613 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||| ||||| ||||| ||||| || ||| ||||| | || Sbjct 3076052 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCT 3075993 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||| |||||||| | |||||||| | || | ||||||||||| Sbjct 3075992 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 3075933 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || ||| ||| || || | ||| |||||| Sbjct 3075932 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 3075873 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || ||||||||||| Sbjct 3075872 TTACCGGTCAAGGTCTTCACGAAGATCTGCAT 3075841 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||| ||||| ||||| ||||| || ||| ||||| | || Sbjct 3076280 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCT 3076221 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||| |||||||| | |||||||| | || | ||||||||||| Sbjct 3076220 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 3076161 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || ||| ||| || || | ||| |||||| Sbjct 3076160 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 3076101 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || ||||||||||| Sbjct 3076100 TTACCGGTCAAGGTCTTCACGAAGATCTGCAT 3076069 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||| ||||| ||||| ||||| || ||| ||||| | || Sbjct 3076508 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCGTCT 3076449 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||| |||||||| | |||||||| | || | ||||||||||| Sbjct 3076448 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 3076389 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || ||| ||| || || | ||| |||||| Sbjct 3076388 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 3076329 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || ||||||||||| Sbjct 3076328 TTACCGGTCAAGGTCTTCACGAAGATCTGCAT 3076297 >seq4924 Length=6499587 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||||||||| || || || Sbjct 3090820 CCGCCCCTCAGACGTAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 3090879 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | ||||||||| | || Sbjct 3090880 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 3090939 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || ||||| || | || || || || || || || | ||| ||| || | Sbjct 3090940 ATGCCTTCCTTATCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGTTCCA 3090997 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || |||||||| || ||||| ||||| Sbjct 3090998 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 3091046 >seq4361 Length=21435851 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| || |||||||| || | |||| ||| Sbjct 2916413 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAGGGAGTGCGGCCATTC 2916472 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || || || |||| | | |||||| | || | ||||||||||| Sbjct 2916473 TCCAGCTGTTTGCCCGCAAAACTCAGACCCTCCTGGTCAGGTGGGATGCCCTCCTTGTCT 2916532 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | |||| ||||||| | | || | ||| ||| || ||| || || |||||| Sbjct 2916533 TGGGTTTTAGCTTTGACGTTTTCGATGGTGTCACTGGGCTGGACCTCGTGTGTGATGGTC 2916592 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||| | |||||||| |||||||| ||||| Sbjct 2916593 TTGCCCATCAGGGTCTTCACAAAGATTTGCAT 2916624 >seq65597 Length=65395183 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||||||||| ||||| || || |||| | || Sbjct 13732730 AGCACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGAGTGCGATTGTCC 13732789 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || || || ||||| | |||||||| || || | || |||||||| Sbjct 13732790 TCCAGCTGTTTGCCCGCAAAAATCAGACACTGCTGGTCATGTGGGATGCCTTCCTTGTCT 13732849 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 ||||| ||||||| | | | | | ||| |||||| | || |||||| Sbjct 13732850 CGGATTTTAGCTTTGACGTTATCAGTGGTGTTACTGGGCTCGACCTTGTGTGTAATGGTC 13732909 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||| | || ||||| || ||||||||||| Sbjct 13732910 TTGCCCATCAGTGTCTTCACGAAGATCTGCAT 13732941 >seq2193 Length=10573696 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/115 (78%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTC--AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||||| | | ||||||||||| | |||| ||| ||||||||||| |||| | Sbjct 4126789 CCTCCCCTCTGAGACGGAGGACCAGGTGCAGGGTGAACTCTTTCTGAATGTTGTAGTTGG 4126730 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 | ||| |||| |||| | ||| ||||||||||| |||||||| | |||||||| Sbjct 4126729 ACAGGACGCGCCCATCTTGCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTC 4126675 >seq7793 Length=19070987 Score = 84.2 bits (92), Expect = 1e-11 Identities = 132/186 (71%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 34797 TGTTATAGTCCGATAGGCTGC-GCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGT 34855 |||| ||||| || || ||| ||| || ||||| || || || || || ||||| || Sbjct 18919823 TGTTTTAGTCTGAGAGAGTGCAGCTG-TCTTCCAGCTGTTTGCCCGCAAAAATCAGACGC 18919765 Query 34856 TGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT 34915 |||||||| | || | ||||||||||| | ||||| ||||||| | | | | Sbjct 18919764 TGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACGTTTTCAGTGGTG 18919705 Query 34916 TCATTGGCCTCGACATCAACGGTTATGGTCTTTCC----CGTGAGGGTCTTTACAAAGAT 34971 ||| ||| |||||| || | | |||||||| || || ||| |||| |||||||| Sbjct 18919704 TCACTGGGCTCGACCTCGAGTGCGATGGTCTTGCCGCAATGTCAGGCTCTTCACAAAGAT 18919645 Query 34972 CTGCAT 34977 |||||| Sbjct 18919644 CTGCAT 18919639 >seq847 Length=4940370 Score = 84.2 bits (92), Expect = 1e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCA 34933 ||||||||||| | ||||| ||||||| | | || | ||| ||| |||||| ||| Sbjct 1644815 CCCTCCTTGTCTTGGATTTTAGCTTTGACGTTTTCAATGGTGTCACTGGGCTCGACCTCA 1644756 Query 34934 ACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || |||||||| || || |||||||| |||||||||||||| Sbjct 1644755 AGTGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1644712 >seq12046 Length=4097285 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||| |||| || |||||| | || || | || |||| Sbjct 930668 AGCACCAGGTGCAGGGTGGACTCTTTCTCGATATTATAGACTGAGAGAGTTCGGCCATCC 930609 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||| || | || | || |||| || ||| || | || | ||||||||||| Sbjct 930608 GCCACCTGTTCGCCCACAAAACTCAGACGATGCCAGTAAGGTGGGATGCCCTCCTTGTCT 930549 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || |||| | | | | ||| || |||||| |||| || |||||| Sbjct 930548 TGGATTTTAGCTTCGACGTTTTCAGTGGTGTCACTGAGCTCGACCTCAAGTGTGATGGTC 930489 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| |||||||||||| || Sbjct 930488 TTGCCTGTCAGGGTCTTCACAAAGATCTGCGTG 930456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325432416545162