Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteropus_20alecto_20[refseq_20GCF_5F000325575.1_202013-12-04]
65,598 sequences; 1,985,975,446 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq5818 98.7 8e-16
seq10551 89.7 4e-13
>seq5818
Length=23789964
Score = 98.7 bits (108), Expect = 8e-16
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963
|||||| ||||||||||| | ||||||| || ||||| || || || |||||||||
Sbjct 4865221 CGGTTTAGCCAAGAAGTTCAGATCACAGAAGCCCGCTGTTTCTACGGCTTCCAAATTGCC 4865280
Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|| ||||| || ||||| |||||||| ||||| || || || || || || ||||||
Sbjct 4865281 ATGGAAAACATACATTCTGAAATGTATAGTCTCCTCATTGACACCTATATTAAAGAT 4865337
>seq10551
Length=27482606
Score = 89.7 bits (98), Expect = 4e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || || |||||||||||||||||||| || ||||| |||||||| || ||||| |
Sbjct 20340140 AAAATCCCTTCGATTTTATGGAAAATATTTCTTTAGAAGGAAAAACAAATTTCTTTGAGA 20340199
Query 44553 AACGCGTTGGAGAATATCAGCG 44574
|||| ||| ||| ||||||||
Sbjct 20340200 AACGAGTTTCAGAGTATCAGCG 20340221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397138243615990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |