Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq105 96.9 7e-15 >seq105 Length=3566936 Score = 96.9 bits (106), Expect = 7e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| || |||||||| || ||||||||||||||| |||| | || ||||| || |||| Sbjct 2108966 TTGTCGCTTTTGCTGCCGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCT 2109025 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 || ||||||| |||| | ||||||| ||||||| |||||||| Sbjct 2109026 GGCTCAAGAAACGGGGACTGATGCCTGGCCTCACCTTTTCCAATGA 2109071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989126362549770