Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq44 82.4 5e-11 >seq44 Length=10323257 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||| |||| ||||||||||| || || ||||||||||| | | || | || ||| Sbjct 7626579 ACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 7626638 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---G 33277 | ||||| || ||| || | | |||||||| | ||| |||||||| || || | Sbjct 7626639 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGG 7626698 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || | | ||| ||||| |||||| || ||||| || || || Sbjct 7626699 ATCTTGGCC---TTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTC 7626755 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || ||||| || ||||| Sbjct 7626756 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 7626787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318637371128412