Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq640 105 6e-18 >seq640 Length=472180 Score = 105 bits (116), Expect = 6e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| || |||||| |||| ||||||||| Sbjct 467302 GGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAATTTTACCTGGAGGAGGTGATG 467243 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || | || || || |||||||| | ||||| ||||| || || |||||| Sbjct 467242 CCCCAGGCTGAGAGCCAGGGCCCAGACATCAAGAAACACGTGAACTCCCTTGGGGAAAAG 467183 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTGC 129026 || || || || | || | || || |||||| Sbjct 467182 CTGAAGACACTCAGGCTGAGGCTTCGGCGCTGC 467150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447548386213280