Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq640 111 1e-19 >seq640 Length=472180 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| || || ||||| || ||||| ||||| ||||| Sbjct 467293 GGTTGCCAAGCCTTGTCGGAGATGATCCAATTTTACCTGGAGGAGGTGATGCCCCAGGCT 467234 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || | || || || ||||| || ||||||| || ||||| || ||||||||||||||| Sbjct 467233 GAGAGCCAGGGCCCAGACATCAAGAAACACGTGAACTCCCTTGGGGAAAAGCTGAAGACA 467174 Query 127291 TTGAGACTTCGACTGCGTCGCTGC 127314 | || || | || || |||||| Sbjct 467173 CTCAGGCTGAGGCTTCGGCGCTGC 467150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429865220950928