Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq55 91.5 1e-13 >seq55 Length=9207070 Score = 91.5 bits (100), Expect = 1e-13 Identities = 111/150 (74%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || ||||| || ||||| || ||||||||||||||| ||||| || || | |||||| Sbjct 7111293 GCGATCATATAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCAAGGCCCATG 7111234 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | || | ||||||||||| ||||| || || ||||| | | ||| || ||||| || Sbjct 7111233 T-CCGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACATAGAACTGGCA 7111175 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | ||| | ||| ||||| || || || || Sbjct 7111174 AAGGGTATGGCATGGAGGTAGGGCCATGAG 7111145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339987974957862