Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq311 93.3 7e-14 >seq311 Length=2724376 Score = 93.3 bits (102), Expect = 7e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | |||||| || ||||||| ||| || || || || | Sbjct 2495135 CCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATAT 2495076 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||||| |||||||||||| || ||||||| | | || | ||||| |||| || Sbjct 2495075 GGATGTTCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAACTGCCATTTTGAGAA 2495016 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||| ||||| || || |||||||| ||||| Sbjct 2495015 CGGTTTTCTGAGAGATTTCCCACACAGTCTT 2494985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794796445852640