Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq105 86.0 6e-12 >seq105 Length=3566936 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| ||||| || | || || ||| | || |||| ||| |||| |||| || Sbjct 2326035 TCCAGCATATGGGGACCAACGTGTGACGGCCTCGACCGCATCGTTGAGCGCTGTGGCTTG 2325976 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || ||| | || || ||||||||| | | |||||||||||||| ||||||| | | | Sbjct 2325975 CCTGAGATGCACGTTGGCGACTGGATGCTCTTTGAAAACATGGGTGCTTACACCGTTGCT 2325916 Query 21242 AGCTCTTCAACCTTTAACGGCTTCC 21266 | |||| ||||| ||||| |||| Sbjct 2325915 GCCGCTTCTACCTTCAACGGGTTCC 2325891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463336459813920