Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq55 82.4 6e-11 >seq55 Length=9207070 Score = 82.4 bits (90), Expect = 6e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || ||||||||||| ||||| || ||||| || ||| || || ||||| || |||||| Sbjct 7111305 CCTGTGATGTGTGCGATCATATAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACA 7111246 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || |||||||| || | || || || || ||||| || || || | | | |||| Sbjct 7111245 CCAAGGCCCATGTCCGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACA 7111186 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 || || || ||||| ||| || ||||| | ||||| Sbjct 7111185 TAGAACTGGCAAAGGGTATGGCATGGAGGTAGGGCCAT 7111148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391773184845322