Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq90525 93.3 9e-14
seq22588 91.5 3e-13
seq151129 89.7 1e-12
seq47983 89.7 1e-12
>seq90525
Length=15459
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 4968 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 4909
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 4908 GCCCCACGTTGGGC 4895
>seq22588
Length=21873
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 20594 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 20535
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 20534 CCCCACGTTGGGC 20522
>seq151129
Length=4240
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 933 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 874
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 873 CCCACGTTGGGC 862
>seq47983
Length=57568
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 54682 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 54741
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 54742 CCCACGTTGGGC 54753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1055648684115000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |