Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq33756 102 2e-16
>seq33756
Length=38327
Score = 102 bits (112), Expect = 2e-16
Identities = 109/139 (78%), Gaps = 5/139 (4%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | |||||||| |||||||| ||||||||| | || || ||
Sbjct 26474 GCATTTTTTGGAGCCCAGATGAATTCTTTCATCCATGTGATTATGTACTCATACTACGGG 26533
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
|| | || | |||||| ||| ||||| |||||||| ||||||||||| || | || |
Sbjct 26534 TTGACTGCATTTGGTCC-ATGGATTCAG-AAGTATCTTTGGTGGAAACGATACTTGACCA 26591
Query 52175 TAATGCAGTTGGTACAGTT 52193
| ||||| | ||| ||||
Sbjct 26592 TGTTGCAGCTAGTA-AGTT 26609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921344636420000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |