Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq63810 89.7 4e-13
>seq63810
Length=35167
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960
|||| || | |||| |||||| || | ||||| ||||||| || ||| | || |||
Sbjct 27933 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCC 27992
Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020
| |||||||||||||| ||||| ||||| || || | || | || ||||| || |
Sbjct 27993 AGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGG 28052
Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080
||| | ||||| | | | ||||| | | ||| || || | || || || ||
Sbjct 28053 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 28112
Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCATTTTCT 43114
||||| | || |||||||| || |||||| |||
Sbjct 28113 CCGGTCAAGGTCTTCACAAAGATCTGCATTGTCT 28146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380623605309000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |