Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013- 09-15] 160,500 sequences; 1,926,439,238 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq124007 86.0 9e-12 >seq124007 Length=20016 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 || ||| | |||||| | | | ||| |||||| || || || ||||| |||||||| Sbjct 15356 CTTTGGTATGCCATCATTGAGTCGCAGACAGAGACAGGTACCCCATACATGCTCTACAAA 15415 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| || || || || |||||||| | || |||| || ||||| || ||||||| Sbjct 15416 GATTCCTGTAACCGGAAAAGCAACCAGCAGAACCTGGGAACGATCAAATGCAGCAATCTG 15475 Query 97299 TGCACGGAAATTGTAGAGTA 97318 ||||| ||||| |||||||| Sbjct 15476 TGCACAGAAATAGTAGAGTA 15495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739572449980000