Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013- 09-15] 160,500 sequences; 1,926,439,238 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq75256 100 2e-16 >seq75256 Length=16458 Score = 100 bits (110), Expect = 2e-16 Identities = 113/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || |||||||||||||||| || || ||||| | |||||| Sbjct 6389 GCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAAGGCACCCCCAGGCCCATG 6448 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | | |||||||| || ||||| || || ||||| ||| |||||| ||||| || Sbjct 6449 T-CTGCTGACCTCTGATACAGCTGGCAGGACAGCTCGCCGTTCACCACGTAGAACTGGCA 6507 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | || | ||||||||| || || || || Sbjct 6508 AAGGGCATGGCACGGAGGTAGGGCCATGAG 6537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339472258966500