Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013- 09-15] 160,500 sequences; 1,926,439,238 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq12448 82.4 7e-11 >seq12448 Length=17785 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || ||||| | ||||| || | || ||| |||| || || | Sbjct 3546 CAAGATGCAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACC 3487 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | || || || || | || ||| ||||| || |||||||| || ||||| | Sbjct 3486 CTCGGATACAATAGAAAATGTAAAAGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTAA 3427 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||| || |||||||| | | ||||||||||| ||||||| | | || || || Sbjct 3426 TCAGCAAAGACTGATCTTTGCAGGCAAGCAACTGGAAGATGGATGCACTGTGTCTGACTA 3367 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206 ||||||||| | || || || ||||| | ||||| ||| Sbjct 3366 AAACATTCAACAGGAGTCCACCCTTCATCTTGTGTTGAGA 3327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429095004877500