Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq12448 82.4 7e-11
>seq12448
Length=17785
Score = 82.4 bits (90), Expect = 7e-11
Identities = 150/220 (68%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||| ||||| | || || ||||| | ||||| || | || ||| |||| || || |
Sbjct 3546 CAAGATGCAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACC 3487
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
| || || || || | || ||| ||||| || |||||||| || ||||| |
Sbjct 3486 CTCGGATACAATAGAAAATGTAAAAGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTAA 3427
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||| || |||||||| | | ||||||||||| ||||||| | | || || ||
Sbjct 3426 TCAGCAAAGACTGATCTTTGCAGGCAAGCAACTGGAAGATGGATGCACTGTGTCTGACTA 3367
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206
||||||||| | || || || ||||| | ||||| |||
Sbjct 3366 AAACATTCAACAGGAGTCCACCCTTCATCTTGTGTTGAGA 3327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429095004877500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |