Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq85480 100 3e-16
seq92079 82.4 8e-11
>seq85480
Length=19824
Score = 100 bits (110), Expect = 3e-16
Identities = 79/95 (83%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | ||||||||||||||||||||| |||||||| |||||| ||||||||| ||
Sbjct 17755 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAG 17696
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246
|| ||||| || || ||||| || |||| ||||||
Sbjct 17695 ATTCCTTCTACTGCGGCAAAAGCTACAACACGTTC 17661
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412
|||||| ||||| || || || | ||| |||||| |||||||| | || |||||
Sbjct 15903 GAATCTTTGATGTAAGTGTCAATGAGGAGACTATACATCTCAGAATGTATGTTTTCCATG 15844
Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462
||||||||||| || |||||||| | ||||| || ||||| ||||||||
Sbjct 15843 GCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTG 15794
>seq92079
Length=13920
Score = 82.4 bits (90), Expect = 8e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414
||||| ||||||||||| |||| || ||||| || || ||||||||||| ||
Sbjct 4832 ATCTCTGATGTATGTATCTATTAGCAAGCTGTACATCTCTGAGTGGACATTCTCGATAAG 4891
Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474
|||||| || || |||||||| | ||| || | | |||||| |||||| ||||| |||
Sbjct 4892 AATTTGAAAGCCATAGAAACAGCGAGCCTCTGGAACCTGCACCTCTTGACTAAATCGCTC 4951
Query 93475 TAC 93477
||
Sbjct 4952 CAC 4954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555743598020000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |