Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq63810 156 8e-33
seq74389 129 1e-24
seq104951 118 2e-21
seq89363 113 8e-20
seq113583 109 1e-18
seq157463 107 4e-18
seq102059 104 4e-17
seq93939 102 1e-16
seq109872 100 5e-16
seq32206 98.7 2e-15
seq123873 89.7 9e-13
seq111920 84.2 4e-11
>seq63810
Length=35167
Score = 156 bits (172), Expect = 8e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || ||||||||||| |||||||| || ||||| || || | ||||||||
Sbjct 27705 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCC 27764
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || ||||| || || | | || ||||| || || ||||| || ||||||||
Sbjct 27765 AGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGG 27824
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| |||||||| |||||||||||| | || || |||| ||||||||| ||
Sbjct 27825 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 27884
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | |||||| ||||| ||||||||
Sbjct 27885 CCGGTCAAGGTCTTCACGAAGATCTGCAT 27913
Score = 152 bits (168), Expect = 9e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || |||||||| || |||||||| || ||||| || || | ||||||||
Sbjct 27477 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCC 27536
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || ||||| || || | | || ||||| || || ||||| || ||||||||
Sbjct 27537 AGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGG 27596
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| |||||||| |||||||||||| | || || |||| ||||||||| ||
Sbjct 27597 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 27656
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | |||||| ||||| ||||||||
Sbjct 27657 CCGGTCAAGGTCTTCACGAAGATCTGCAT 27685
Score = 149 bits (164), Expect = 1e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || |||||||| || |||||||| || ||||| || || | ||||||||
Sbjct 27933 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCC 27992
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || ||||| || || | | || ||||| || || ||||| || ||||||||
Sbjct 27993 AGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGG 28052
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| |||||||| |||||||||||| | || || |||| ||||||||| ||
Sbjct 28053 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 28112
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | |||||| || || |||||||||
Sbjct 28113 CCGGTCAAGGTCTTCACAAAGATCTGCATT 28142
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | | ||||| |||| || || |||||||| || |||||||| || |||||
Sbjct 27231 CCTCCCCTCAAGCGCAGGACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 27290
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | ||| || ||||| || || | || || ||||| || ||
Sbjct 27291 AGAGTGCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 27350
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||| || |||||||| ||||| |||||||| |||||||||||| | || ||
Sbjct 27351 CTGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 27410
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||||||| | || || |||||| ||||| ||||||||
Sbjct 27411 TCCAGGGTGATGGACTGACCGGTCGAGGTCTTCACGAAGATCTGCAT 27457
>seq74389
Length=16610
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||||||||| ||||| ||||| || ||||| || | ||||| ||
Sbjct 10475 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTCC 10416
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || ||||| || || || | ||||| ||||| ||||| ||||||| |||
Sbjct 10415 ATCTGTTTGCCGGCAAAAATCAGATGCTCCTGGTCAGGTGGGATGCCCTCCTTGTGTTGG 10356
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || || ||||| |||||| ||||| | || | || | |||||||| ||
Sbjct 10355 ATTTTAGCTTTGACATTCTCGATAGTGTCACTGGGCTCGATCTCAAGTGTGATGGTCTTG 10296
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| | |||||| || || ||||||||
Sbjct 10295 CCCGTCAAGGTCTTCACAAAGATCTGCAT 10267
>seq104951
Length=12537
Score = 118 bits (130), Expect = 2e-21
Identities = 153/210 (73%), Gaps = 1/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||||||||| | ||||||||| || ||||| || | ||||| ||
Sbjct 11034 ACCAAGTGCAGAGTGGACTCTTTCTCGATGTTATAGTCTGAGAGAGTGCGGCCATCCTCC 11093
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || | || || || | || ||||| ||||| ||||| |||||||||||
Sbjct 11094 AGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 11153
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA-CTTCCAAGGTGATGGTTTT 68431
|| || || |||||| || || ||||| | || | ||| | |||||||| ||
Sbjct 11154 ATTTTGGCTTTGACGTTTTCAATAGTGTCACTGGGCTCGACCTTTGAGTGTGATGGTCTT 11213
Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || ||||| || | || ||||||||
Sbjct 11214 GCCTGTCAGGGTTTTCCCAAAGATCTGCAT 11243
>seq89363
Length=18264
Score = 113 bits (124), Expect = 8e-20
Identities = 151/207 (73%), Gaps = 5/207 (2%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||||||||| ||||| |||||||| |||| || ||||| ||
Sbjct 15792 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAATCTAAGAGAGTGG--CCATCCTCC 15849
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || | || | |||| || ||||| | ||| ||||| |||||||||||
Sbjct 15850 AGCTGTTTGCCCTCAAAAAGCAGTCGCTGCTGGTCAGATGGGATGCCCTCCTTGTCTTGG 15909
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || || |||||| ||| ||||||| | || || || | || ||||| ||
Sbjct 15910 ATTTTAGCGTTGACGTTCTCAGTGGTGTCACTGGGCTCGACCTCGA--GT-ATGGTCTTG 15966
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGC 68459
||| | |||||||| || || ||||||
Sbjct 15967 CCCATCAGGGTCTTCACAAAGATCTGC 15993
>seq113583
Length=22641
Score = 109 bits (120), Expect = 1e-18
Identities = 151/209 (72%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| | ||||||||||| ||||| ||||| || ||||||| || ||||| ||
Sbjct 17442 ACCAAGTGCACGGTGGACTCTTTCTGGATATTATAGTCTGAGAGTG--CTGCCATCCTCC 17499
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || | || || | || || || || || ||||| |||| ||||||
Sbjct 17500 AGCTGTTTGCCCGCACAAATCAGACGCTGCTGCTCAGGCGGGATGCCCTCCTGGTCTTGG 17559
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| | || ||||| ||| | ||||| | || || || | |||||||| ||
Sbjct 17560 ATTTGAGCTTTGACATGCTCAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGGTCTTG 17619
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| || || ||||||||
Sbjct 17620 CCCGTCAGGGTCTTCAC-AAGATCTGCAT 17647
>seq157463
Length=7943
Score = 107 bits (118), Expect = 4e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| | ||| || | || || |||||||||||||| ||||| || || ||
Sbjct 334 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGAC 393
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||||| | |||||| || || || || ||||||| || | || |||
Sbjct 394 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCGGTCTTTGCTGAGCAGGAGGA 453
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||| || || |||| ||||| | || || || | | | ||| ||
Sbjct 454 ATTCCTTCCTTATCCTGGGTCTTGGCCTTTATATTTTCTATTGTACCCGAGGGTTCAACC 513
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || || ||| | || ||||| | ||||||
Sbjct 514 TCAAGAGTGATGGTCTTCCCAGTAAGGATTTTCACGAAAAGCTGCAT 560
>seq102059
Length=16704
Score = 104 bits (114), Expect = 4e-17
Identities = 110/145 (76%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 68257 AGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACT 68316
|||| || ||||||| || ||| |||| || ||||| || || | |||||||| | ||
Sbjct 6009 AGTGCAGAGTGGACTTCTTCTGGGTGTTGTAGTCGGACAGAGTGCATCCATCTTCCAGCT 6068
Query 68317 GCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCT 68376
| ||||| || || || || || ||||| || || ||||| || |||||||| ||||
Sbjct 6069 GTTTCCCAGCAAAGATCTACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGGATCT 6128
Query 68377 TTGCCTTGACGGCCTCGATGGTGTC 68401
| |||||||| ||||||||||||
Sbjct 6129 TGGCCTTGACATTCTCGATGGTGTC 6153
>seq93939
Length=21031
Score = 102 bits (112), Expect = 1e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || |||||| |||| ||| | ||| | || || | || | ||||| ||
Sbjct 20757 ACCAAGTGCAGGGTGGACCCTTTCTGGCTATTAGAGTCTAAGCGAGTGCGGCCATCCTCC 20698
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || | || || | ||| ||||| ||||| |||||||||||
Sbjct 20697 AGCTGTTTGCCTGCAAAAACCAGATGCTGCTAGTCAGGTGGGATGCCCTCCTTGTCTTGG 20638
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || ||||| ||| |||||||| | || || |||| || |||||| ||
Sbjct 20637 ATTAGAGCTTTGACATTCTCCATGGTGTCACTGGGCTCGACCTCCAGGGGGATGGTCTTG 20578
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| | || ||||||||
Sbjct 20577 CCCGTCAGGGTCTTCCCAAAGATCTGCAT 20549
>seq109872
Length=19372
Score = 100 bits (110), Expect = 5e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| | || |||||||||||||| || ||||| || ||||| | | ||||| || |
Sbjct 16140 CCAACCGGAGAGTGGACTCTTTTTGCATATTATAGTCTGAGAGAATGCGACCATCCTCCA 16199
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||| || || || || | || | ||| ||||| ||||| ||||||||| ||||||| |
Sbjct 16200 GCTGTTTGCCCGCAAAAAACAGACATTGCTGGTCAGGTGGGATGCCTTCCGTGTCTTGGA 16259
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
| || || ||||| ||| | ||||| | || || || | | ||||| | |
Sbjct 16260 TTTTAGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTCAAGTGCAATGGTCTAGC 16319
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||| || || ||||||||
Sbjct 16320 CCTTCGGGGTCTTCACAAAGATCTGCAT 16347
>seq32206
Length=52285
Score = 98.7 bits (108), Expect = 2e-15
Identities = 148/209 (71%), Gaps = 10/209 (5%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || |||||||| || ||||||||| | || ||||| || | ||||| ||
Sbjct 18139 ACCAAGTGCAGAGTGGACTCCTTCTGGATGTTAGAGTCTGAGAGAGTGCAGCCATCCTCC 18080
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || || || | || || | ||||| ||||| |||||||||||
Sbjct 18079 AGCTGCTTGCCCGCAAAATTCAGA------TGCT--GGTGGGATGCCCTCCTTGTCTTGG 18028
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || || ||||| ||| | ||||| | || || || | |||||||| ||
Sbjct 18027 ATTTTAGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTTG 17968
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||||| || || ||||||||
Sbjct 17967 CCCGCGAGGGTC--CACAAAGATCTGCAT 17941
>seq123873
Length=8769
Score = 89.7 bits (98), Expect = 9e-13
Identities = 147/209 (70%), Gaps = 5/209 (2%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||||||||| ||||| ||||| || ||||| || ||||| ||
Sbjct 312 ACCAAGTGCAG-GTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGGCCATCCTCC 254
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || || || | || ||||| || || |||| ||||||||||
Sbjct 253 AGCTGTTTGCCTGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGC---CCTTGTCTTGG 197
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || || ||||| ||| | ||||| | | || || | |||||| | ||
Sbjct 196 ATTTTAGCTTTGACATTCTCAGTAGTGTCACTGGGCTTGACCTCGAGTGTGATGTTCTTG 137
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| | |||||||| || || ||||||||
Sbjct 136 TCTATCAGGGTCTTCAC-AAGATCTGCAT 109
>seq111920
Length=52810
Score = 84.2 bits (92), Expect = 4e-11
Identities = 145/208 (70%), Gaps = 7/208 (3%)
Strand=Plus/Minus
Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
||||||| || ||||||||||| ||| |||| | || ||||| || ||||| |||
Sbjct 40507 CCAAGTGCAGGGTGGACTCTTTCTGGCTGTTCTTGTCTGAGAGAGTTTAGCCATCCTCT- 40449
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||| || | || ||||| | || ||||| || || ||| | | ||||||||| |
Sbjct 40448 GCTGTTTATCTGCAAATATCGGATGCTGCTGGTCAGGCGGGATGACCTTCTTGTCTTGGA 40389
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
| || || ||||| | ||||||||| ||| || || | |||||||| | |
Sbjct 40388 TTTTGGCTTTGACATTCCTGATGGTGTC-ACTG-----ACCTCGAGGGTGATGGCGCTGC 40335
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||| ||| || || ||||| ||
Sbjct 40334 CCGTCAGGGGCTTCACAAAGATCTGTAT 40307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 919773395060000
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