Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq48881 114 1e-20
seq63810 96.9 4e-15
seq32806 95.1 1e-14
seq65056 91.5 2e-13
seq64078 91.5 2e-13
seq97442 89.7 6e-13
seq90416 89.7 6e-13
seq2401 87.8 2e-12
seq12135 86.0 7e-12
seq18747 84.2 2e-11
seq104951 82.4 8e-11
seq89363 82.4 8e-11
>seq48881
Length=14873
Score = 114 bits (126), Expect = 1e-20
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || || | ||||| |||| |||| || ||| || || || ||||| ||||
Sbjct 7387 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 7446
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| || | || || |||||||| || || || ||||| | ||||||||| | ||
Sbjct 7447 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 7506
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| || |||||| ||| ||| || || | || | | |||||||| | |||||
Sbjct 7507 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 7566
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214
|| | |||||||| |||||||| || ||||| || || ||||||||||| ||
Sbjct 7567 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAAATTTGCATTTTGAC 7619
>seq63810
Length=35167
Score = 96.9 bits (106), Expect = 4e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||| | ||| | |||| |||| ||| |||||| || || ||||| || | |
Sbjct 27915 CCCCCTCTGAGACGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 27974
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| || | || || ||||| || || || || || | ||||||||||| | ||
Sbjct 27975 AGAGTGCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGG 28034
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| || ||| ||||| ||| || |||| || | | ||||| || | |||||
Sbjct 28035 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 28094
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212
|| | |||||||| || || || | ||||| |||||||| |||||| ||
Sbjct 28095 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACAAAGATCTGCATTGTC 28145
Score = 89.7 bits (98), Expect = 6e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||| | ||| | |||| |||| ||| |||||| || || ||||| || | |
Sbjct 27459 CCCCCTCTGAGACGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 27518
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| || | || || ||||| || || || || || | ||||||||||| | ||
Sbjct 27519 AGAGTGCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGG 27578
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| || ||| ||||| ||| || |||| || | | ||||| || | |||||
Sbjct 27579 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 27638
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| || || || | ||||| || ||||| |||||
Sbjct 27639 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 27685
Score = 86.0 bits (94), Expect = 7e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||| | ||| | |||| |||| ||| ||| || || || ||||| || | |
Sbjct 27687 CCCCCTCTGAGACGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 27746
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| || | || || ||||| || || || || || | ||||||||||| | ||
Sbjct 27747 AGAGTGCGTCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCAGGGGGG 27806
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| || ||| ||||| ||| || |||| || | | ||||| || | |||||
Sbjct 27807 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 27866
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| || || || | ||||| || ||||| |||||
Sbjct 27867 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 27913
>seq32806
Length=18495
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
|||||| |||| ||| ||| || || ||||| || || | ||||| || | || ||
Sbjct 13611 CACCAAGTGCAGAGTGAACTCTTTCTGGATATTTTAGTCTGAGAGAGTGCGGCCATCGTC 13552
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
||||| || | || || | | ||||||||||| | ||| | || |||||| ||
Sbjct 13551 CAGCTGTTTGCTGGCAAAAGTCCGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTG 13492
Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
| |||| ||||| || | | || || || | ||||| |||| |||||||| ||
Sbjct 13491 GGTTTTAGCTTTGACATTCTCAATAGTATCACTGGGCTCCACCTCGAGTGTGATGGTCTT 13432
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || || ||||| |||||||| |||||
Sbjct 13431 GCCTGTCAGGGTCTTCACAAAGATGTGCAT 13402
>seq65056
Length=14552
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 4304 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 4245
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 4244 ATACTAACGAGGA 4232
>seq64078
Length=34826
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 26260 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 26201
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 26200 TACTAACGAGGAT 26188
>seq97442
Length=63513
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 30226 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 30167
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 30166 TACTAACGAGGA 30155
>seq90416
Length=8837
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 2300 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2359
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 2360 TACTAACGAGGA 2371
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 5790 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5849
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 5850 TACTAACGAGGA 5861
>seq2401
Length=18371
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| |||| ||| | | || || ||||| || || | ||||| || |
Sbjct 360 ACGAAGCACCAAGTGCAGAGTGGACGCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCC 301
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || ||||| || || || || || || ||||||||||| | ||| | | ||||||
Sbjct 300 ATCCTCCAGCTGTTTGCCTGCAAAAATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTT 241
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|| || ||| ||||| || | | ||||| | | | || || | |||||
Sbjct 240 GTTTTGGAGTTTAGCTTTGACATTCTCAATAGTGTCATTGGGCCCGACCTCAAGGGTGAT 181
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| ||||| ||||| ||||| ||| |||| |||||
Sbjct 180 GGTCTTGCCTGTTAGGGTCTTCACACAGATCTGCAT 145
>seq12135
Length=8511
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||||||| |||
Sbjct 565 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCCCTA 624
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 625 TACTAACGAGGA 636
>seq18747
Length=37247
Score = 84.2 bits (92), Expect = 2e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
|||||| || || || || || || ||||||||||||| || | || |||||||||
Sbjct 35527 TAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCTTG 35586
Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
|||||| ||||| | |||| ||||| | | | || |||| |||||||| ||
Sbjct 35587 GATTTTAGCTTTGA-CTTCGCAGTAGTGTCACGGGGCTTGACCTCGAGTGTGATGGTCTT 35645
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||||| || ||||| || ||||| |||||
Sbjct 35646 GCCCGTCAGGGTCTTCAC-AAGATCTGCAT 35674
>seq104951
Length=12537
Score = 82.4 bits (90), Expect = 8e-11
Identities = 149/217 (69%), Gaps = 1/217 (0%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| |||| ||| ||| || | || || || || | ||||| || |
Sbjct 11027 ACGAAGCACCAAGTGCAGAGTGGACTCTTTCTCGATGTTATAGTCTGAGAGAGTGCGGCC 11086
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || ||||| || || | || || || ||||||||||| | ||| | || ||||||
Sbjct 11087 ATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTT 11146
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCA-CATCGACCGTGA 42171
||| |||||| ||||| | | | ||||| || | || | | | || ||||
Sbjct 11147 GTCTTGGATTTTGGCTTTGACGTTTTCAATAGTGTCACTGGGCTCGACCTTTGAGTGTGA 11206
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| ||||| || || || || ||||||| |||||
Sbjct 11207 TGGTCTTGCCTGTCAGGGTTTTCCCAAAGATCTGCAT 11243
>seq89363
Length=18264
Score = 82.4 bits (90), Expect = 8e-11
Identities = 146/208 (70%), Gaps = 5/208 (2%)
Strand=Plus/Plus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
|||||| |||| ||| ||| || || ||||| ||||| ||||| || | || ||
Sbjct 15791 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAATCTAAGAGAGTG-GC-CATCCTC 15848
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
||||| || || | || | |||||||||||||| | ||| | || |||||||||
Sbjct 15849 CAGCTGTTTGCCCTCAAAAAGCAGTCGCTGCTGGTCAGATGGGATGCCCTCCTTGTCTTG 15908
Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
|||||| |||| || | ||||| || | || || |||| || ||||| ||
Sbjct 15909 GATTTTAGCGTTGACGTTCTCAGTGGTGTCACTGGGCTCGACCTCGA--GT-ATGGTCTT 15965
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGC 42206
|||| | || ||||| |||||||| |||
Sbjct 15966 GCCCATCAGGGTCTTCACAAAGATCTGC 15993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542122979320000
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