Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq48881 127 2e-24
seq63810 122 9e-23
seq5492 114 1e-20
seq33159 111 2e-19
seq12448 107 2e-18
seq157463 105 7e-18
seq32806 96.9 3e-15
seq90327 89.7 5e-13
seq66463 86.0 6e-12
seq104951 84.2 2e-11
>seq48881
Length=14873
Score = 127 bits (140), Expect = 2e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || |||||||| || | | ||||| | ||||| |||||||||||
Sbjct 7417 GTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 7476
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||||| ||||||||| || || || || || || || || || || |||
Sbjct 7477 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 7536
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | || || | || ||||| || | || | ||||||||| |||| ||
Sbjct 7537 ACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 7596
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| |||||||||||||||||
Sbjct 7597 TTCACGAAAATTTGCATTTT 7616
>seq63810
Length=35167
Score = 122 bits (134), Expect = 9e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| || |||||||| || | | ||||| | ||||| ||||| ||||||
Sbjct 27717 GTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAGCTGTTTGCCG 27776
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | |||||||||||| || || || || ||||| ||||| || || |||
Sbjct 27777 GCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 27836
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | || |||| || ||||| || | || | |||||| |||||||| ||
Sbjct 27837 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGTC 27896
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 27897 TTCACGAAGATCTGCAT 27913
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | | ||||| | ||||| ||||| ||||||
Sbjct 27489 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAGCTGTTTGCCG 27548
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | |||||||||||| || || || || ||||| ||||| || || |||
Sbjct 27549 GCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 27608
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | || |||| || ||||| || | || | |||||| |||||||| ||
Sbjct 27609 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGTC 27668
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 27669 TTCACGAAGATCTGCAT 27685
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | | ||||| | ||||| ||||| ||||||
Sbjct 27945 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAGCTGTTTGCCG 28004
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | |||||||||||| || || || || ||||| ||||| || || |||
Sbjct 28005 GCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 28064
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | || |||| || ||||| || | || | |||||| |||||||| ||
Sbjct 28065 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGTC 28124
Query 64427 TTTACGAAAATTTGCATT 64444
|| || || || ||||||
Sbjct 28125 TTCACAAAGATCTGCATT 28142
>seq5492
Length=9153
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || |||||||||||||| || |
Sbjct 3829 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 3770
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||| | | ||||| | |||||||| ||| | || || | ||||| || |||||
Sbjct 3769 CAAAGTGCACCCATCTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 3710
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || |||||| || || ||
Sbjct 3709 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCAAGGGTTCAAC 3650
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| || || | ||||| |||||||| ||||| ||
Sbjct 3649 CTCGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 3599
>seq33159
Length=15523
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || |||||||||||||| || |
Sbjct 2091 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 2150
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||| | ||||| || |||||||| ||| | || || | | | | || |||||
Sbjct 2151 CACAGTGCATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACAGATCAGGAGG 2210
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||| |||| || || ||||| || ||||||| || | |||||| || || ||
Sbjct 2211 AATTTCTTCCTTATCCTGTATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAAC 2270
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| || || | ||||| || ||||| ||||| ||
Sbjct 2271 CTCGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACAAAAATCTGCATCTT 2321
>seq12448
Length=17785
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || | ||||||||| || || | || |||| |
Sbjct 3327 TCTCAACACAAGATGAAGGGTGGACTCCTGTTGAATGTTTTAGTCAGACACAGTGCATCC 3386
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| || |||||||| ||| | || || | ||||| | |||||||||||||||||
Sbjct 3387 ATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGATTAGGAGGAATTCCTTCTTT 3446
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || |||||| || | |||||| || || || || | || |
Sbjct 3447 ATCCTGGATCTTGGCTTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGAT 3506
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || || | ||||| |||||||| ||||| ||
Sbjct 3507 GGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 3545
>seq157463
Length=7943
Score = 105 bits (116), Expect = 7e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || ||||||||||||||||| ||||
Sbjct 333 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTGA 392
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| ||||||||||| ||| | || | | ||||| | |||||
Sbjct 393 CAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCGGTCTTTGCTGAGCAGGAGG 452
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || | || ||||| | || | |||| | || || ||
Sbjct 453 AATTCCTTCCTTATCCTGGGTCTTGGCCTTTATATTTTCTATTGTACCCGAGGGTTCAAC 512
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | ||| | |||||| || || | |||| ||||||| ||||| ||
Sbjct 513 CTCAAGAGTGATGGTCTTCCCAGTAAGGATTTTCACGAAAAGCTGCATCTT 563
>seq32806
Length=18495
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
||||| || || || || |||| || ||||| | || || ||||| |||| |||| ||
Sbjct 13592 TCTTTCTGGATATTTTAGTCTGAGAGAGTGCGGCCATCGTCCAGCTGTTTGCTGGCAAAA 13533
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAAC 64371
| | ||||||||||| || || || || || || ||||| |||| ||||| |||
Sbjct 13532 GTCCGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTG-GGTTTTAGCTTTGACATT 13474
Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431
||| | ||||||| || ||||| || | || | ||||||||| |||| || || ||
Sbjct 13473 CTCAATAGTATCACTGGGCTCCACCTCGAGTGTGATGGTCTTGCCTGTCAGGGTCTTCAC 13414
Query 64432 GAAAATTTGCAT 64443
|| || |||||
Sbjct 13413 AAAGATGTGCAT 13402
>seq90327
Length=63722
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297
||||||| || || || |||| ||||||||| || | | ||| | | ||||| ||
Sbjct 54690 AGATGAAGAGTGGACTCCTTTTAAATGTTGTAGTCAGACAAGGTACATCCATCTTCCAGT 54631
Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357
|||||||| ||| | | || | ||||| || |||||||||||||| || || || ||
Sbjct 54630 TGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATC 54571
Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417
|| |||||| || |||||| || || || || | ||| | |||||| |||
Sbjct 54570 TTGGCTTTTACATTTTCTCTTGTATCTGAGGGTTCAACCTCAAGAGTGATGGTCTTCCCG 54511
Query 64418 GTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| |||| | |||||| ||||| ||
Sbjct 54510 GTATGGGTTTCCATGAAAATCTGCATCTT 54482
>seq66463
Length=18175
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/217 (70%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| ||||| ||| ||| || || || ||| ||||||||||| | | || || |
Sbjct 9838 TCTCAGCACAAGACGAAA-GTGGACTCCTTTGGAATGTTGTAACC----AAAGTACGTCC 9784
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
|||| || |||||||| ||| | | |||| ||||| | |||||||||||||||||
Sbjct 9783 ACCTTCCAGTTGCTTGCCAGCAAAGCTCAGCCTTTGCTGAGCAGGAGGAATTCCTTCTTT 9724
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| | || || ||||||| || | |||||| || || | || | ||| |
Sbjct 9723 ATCCCGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAGCCTCCAGAGTGAT 9664
Query 64408 GG-TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| |||| || || | ||||| |||||||| |||||
Sbjct 9663 GGTTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 9627
>seq104951
Length=12537
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/215 (70%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| | || | || || ||||| | ||||| || |||| || ||||| | ||
Sbjct 11030 AAGCACCAAGTGCAGAGTGGACTCTTTCTCGATGTTATAGTCTGAGAGAGTGCGGCCATC 11089
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| ||||| ||||| || |||| || ||||||||||| || || || || || || ||
Sbjct 11090 CTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTC 11149
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA-CTTCTACAGTTACG 64408
||| | |||| ||||| || || | || |||| || || | ||| | || | |
Sbjct 11150 TTGGA-TTTTGGCTTTGACGTTTTCAATAGTGTCACTGGGCTCGACCTTTGAGTGTGATG 11208
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| |||| ||||| | || || |||||
Sbjct 11209 GTCTTGCCTGTCAGGGTTTTCCCAAAGATCTGCAT 11243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498642387620000
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