Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq12448 89.7 5e-13
seq124007 84.2 2e-11
>seq12448
Length=17785
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| |||||||| ||||| || || || |||| ||| || || || || || ||
Sbjct 3325 AGTCTCAACACAAGATGAAGGGTGGACTCCTGTTGAATGTTTTAGTCAGACACAGTGCAT 3384
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| |||| ||| || ||||| | |||| || |||||| | || ||||| ||||||
Sbjct 3385 CCATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGATTAGGAGGAATTCCTTCT 3444
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
||||| || || || ||| | ||||| || || || | || || ||||| ||
Sbjct 3445 TTATCCTGGATCTTGGCTTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTG 3504
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || || || || || ||||| || ||||| ||||||
Sbjct 3505 ATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCATC 3543
>seq124007
Length=20016
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665
|| || || || || ||||||||||||||||| |||| ||| |||||| ||| |||
Sbjct 15386 GAGACAGGTACCCCATACATGCTCTACAAAGATTCCTGTAACCGGAAAAGCAACCAGCAG 15445
Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706
||| ||||||| || ||||| || ||||| ||| | |||||
Sbjct 15446 AACCTGGGAACGATCAAATGCAGCAATCTGTGCACAGAAAT 15486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451096368580000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |